Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1100 168 1e-39 seq1008 132 1e-28 seq294 132 1e-28 seq141 132 1e-28 seq504 109 1e-21 seq160 104 5e-20 seq1140 96.9 7e-18 seq861 96.9 7e-18 seq165 96.9 7e-18 seq25 96.9 7e-18 seq719 89.7 1e-15 seq291 82.4 2e-13 seq147 80.6 6e-13 >seq1100 Length=112111 Score = 168 bits (186), Expect = 1e-39 Identities = 170/219 (78%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 52 AGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCT 111 |||| | | |||||||| |||||||||| || |||||||| |||||||| ||||||| | Sbjct 31750 AGTGTCTAGATCGTTACACCTTTCGTGCAGGACGGAACTTCCCCGACAAAGAATTTCACA 31691 Query 112 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT---TC 168 |||||||||||||||||||||||| |||| || || || |||| ||| | ||| || Sbjct 31690 ACCTTAGGACCGTTATAGTTACGGTCGCCATTCACGGGAGCTTCGGTTGCCGGCTCCCTC 31631 Query 169 G-ATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACA 227 | || | || | |||| ||||||| |||| | ||| | ||||||||| ||||| Sbjct 31630 GTCTTCAAGTCACCAACTTCCTTGACCTTCCGGCACTGAGCAAGTGTCAGCTCCCATACA 31571 Query 228 TCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAA 266 | |||||||||||| ||||| | |||| | ||| ||||| Sbjct 31570 TGGTCTTGCGACTTTGCAGAGATCTGTATATTTTGTAAA 31532 >seq1008 Length=138720 Score = 132 bits (146), Expect = 1e-28 Identities = 132/171 (77%), Gaps = 10/171 (6%) Strand=Plus/Minus Query 191 AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAAC 250 |||||||||||||| |||||| ||||| ||||||||||| || | |||||||||| | Sbjct 45639 AACCTTCCAGCACCAGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTC 45580 Query 251 CTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC------ATAGAC 304 |||||||||| |||||||||||| ||| | | ||| || | | | ||| Sbjct 45579 CTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCTGCTTTCCTAATCAAAAGAT 45520 Query 305 AG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 || ||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct 45519 AGGAGAGCATCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCAAGTTCCTT 45469 >seq294 Length=511472 Score = 132 bits (146), Expect = 1e-28 Identities = 132/171 (77%), Gaps = 10/171 (6%) Strand=Plus/Plus Query 191 AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAAC 250 |||||||||||||| |||||| ||||| ||||||||||| || | |||||||||| | Sbjct 434655 AACCTTCCAGCACCAGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTC 434714 Query 251 CTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC------ATAGAC 304 |||||||||| |||||||||||| ||| | | ||| || | | | ||| Sbjct 434715 CTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCTGCTTTCCTAATCAAAAGAT 434774 Query 305 AG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 || ||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct 434775 AGGACAGCATCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCAAGTTCCTT 434825 >seq141 Length=802350 Score = 132 bits (146), Expect = 1e-28 Identities = 106/128 (83%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 ||||||||||| || || | ||||||||||| | |||||||| |||||||| ||| || Sbjct 800127 ATTTCACCGAGCCTCTTTTCGAGACAGTGCCTAGATCGTTACTTCTTTCGTGTAGGTTGG 800186 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 |||||| ||| |||| |||||| |||||||||||| |||||||||| ||| ||| || || Sbjct 800187 AACTTATCCGTCAAGAAATTTCACTACCTTAGGACTGTTATAGTTATGGCTGCCATTCAC 800246 Query 147 TGGGGCTT 154 |||||| Sbjct 800247 CAGGGCTT 800254 >seq504 Length=335941 Score = 109 bits (120), Expect = 1e-21 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||| ||| ||| ||||||||||| | |||||| ||||| |||||| | | Sbjct 231202 CCTTGACCTTCCGGCATTGGGTAGGCGTCAGCTTCCATACATGGTCTTACGACTTTGTGG 231143 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 | ||||||||||||||||||||||||| |||||| || ||||| || Sbjct 231142 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC 231095 >seq160 Length=728484 Score = 104 bits (114), Expect = 5e-20 Identities = 115/148 (78%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||| ||||||| |||| ||||||| ||| |||| |||||| |||| |||||| || || Sbjct 400997 CTTGACCTTCCTGCACTGGGCAGGAATCAACTCCCATACATGGTCTCACGACTTTGCGGA 401056 Query 248 AACCTGTG-TTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC-CTGTCATAGACA 305 || |||| ||||||||||||||| | || ||||||| ||||| | | | || Sbjct 401057 GAC-TGTGCTTTTTGGTAAACAGTTGACCGGACCTATTCACTGCGACTCCCTTTGCGAAG 401115 Query 306 GG-CACCCCTTCTCCCTAAGTTACGGGG 332 || ||||||||||||| ||||||||||| Sbjct 401116 GGACACCCCTTCTCCCGAAGTTACGGGG 401143 >seq1140 Length=103875 Score = 96.9 bits (106), Expect = 7e-18 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 48 AGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTT 107 ||| || | ||| || |||||||||||| ||| |||| |||||| | |||||||||| Sbjct 20829 AGATAGAGGCCAGATAGTTACGCCTTTCATGCAGGTCAAAACTTATCTAACAAGGAATTA 20888 Query 108 CGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGG 150 | |||||||| ||||||||||||||| | | || || |||||| Sbjct 20889 CACTACCTTAAGACCGTTATAGTTACAGTCACCATTCACTGGG 20931 >seq861 Length=170059 Score = 96.9 bits (106), Expect = 7e-18 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 48 AGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTT 107 ||| || | ||| || |||||||||||| ||| |||| |||||| | |||||||||| Sbjct 142376 AGATAGAGGCCAGATAGTTACGCCTTTCATGCAGGTCAAAACTTATCTAACAAGGAATTA 142435 Query 108 CGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGG 150 | |||||||| ||||||||||||||| | | || || |||||| Sbjct 142436 CACTACCTTAAGACCGTTATAGTTACAGTCACCATTCACTGGG 142478 >seq165 Length=715179 Score = 96.9 bits (106), Expect = 7e-18 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 58 CAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 117 || |||||||| | ||| |||||||||||||||| |||||||||||||| ||||||||| Sbjct 395924 CAGATCGTTACACGTTTAATGCGGGTCGGAACTTAGCCGACAAGGAATTT-GCTACCTTA 395866 Query 118 GGACCGTTATAGTTA 132 |||||||||| |||| Sbjct 395865 GGACCGTTATTGTTA 395851 Score = 91.5 bits (100), Expect = 3e-16 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 58 CAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 117 || |||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||| Sbjct 435120 CAGATCGTTACACCTTTAATGCGGGTCGGAACTTACCCAACAAGGAATTTTGCTACCTTA 435061 Query 118 GGACCGTTATAGTTA 132 |||| ||| |||| Sbjct 435060 TGACCATTACTGTTA 435046 >seq25 Length=1429342 Score = 96.9 bits (106), Expect = 7e-18 Identities = 119/161 (74%), Gaps = 5/161 (3%) Strand=Plus/Minus Query 60 AATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 119 |||| |||||| | | ||| |||| ||||||| || ||||| ||||||||||||||||| Sbjct 751800 AATCATTACGCGTGTTGTGTGGGTTAGAACTTAACCAACAAGAAATTTCGCTACCTTAGG 751741 Query 120 ACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC----T 175 |||||||||||||| | |||| || || | ||||| ||| | ||| | | | | Sbjct 751740 ACCGTTATAGTTACTGTCGCC-TTCACCGAGGCTTCGGTTGCCGGCTCCCCTGTCAATAT 751682 Query 176 CTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCA 216 | || | |||| |||||| |||| ||||||||||| Sbjct 751681 GTCACCAACTTCCTTGACCTTCTGGCACTAGGCAGGCGTCA 751641 >seq719 Length=217272 Score = 89.7 bits (98), Expect = 1e-15 Identities = 83/104 (80%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||||||||||| |||| ||||||| ||| | || |||||| ||| |||||| | | Sbjct 150112 CCTTAACCTTCCTGCACTGGGCAGGGTTCAACCCCCATACATGCTCTCACGACTTTGTAC 150171 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGC 290 | |||||||||||||||||| |||||| | ||||| || |||| Sbjct 150172 ACACCTGTGTTTTTGGTAAA-AGTCGCCTCGGCCTGCTCACTGC 150214 >seq291 Length=518365 Score = 82.4 bits (90), Expect = 2e-13 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 211 GCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGT 270 |||||| | || |||||| ||||| | |||| ||||| |||||||||||||||| ||||| Sbjct 252618 GCGTCATCCCCCATACATGGTCTTACAACTTTGCAGAGACCTGTGTTTTTGGTACACAGT 252677 Query 271 CGCTTGGGCCTATTCTCTGC 290 ||| |||||| || |||| Sbjct 252678 CGCCCGGGCCTGGTCACTGC 252697 >seq147 Length=785644 Score = 80.6 bits (88), Expect = 6e-13 Identities = 166/244 (68%), Gaps = 20/244 (8%) Strand=Plus/Minus Query 118 GGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCT 177 |||| |||| |||||| | | ||||||||||||||| |||| ||| ||| Sbjct 254121 GGACAGTTAGAGTTACTGTTGACGTTTACTGGGGCTTCCATTCAAAGCT--------TCT 254070 Query 178 AACAGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG 235 |||| || ||| |||||| || |||||||| ||||| |||||||||| || Sbjct 254069 AACACCTCTGCTTCCGACCTTCTGACATCGGGCAGGTGTCAG--AATATACATCGTGTTA 254012 Query 236 CGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295 | || ||| ||| ||| ||||||| | ||||||| || ||| | | ||| | | Sbjct 254011 CCACATAGAAGAGTCCTATGTTTTTAATTAACAGTCACTACCCCCTGGTATGTGCCACTT 253952 Query 296 --GTCAT--AGACA----GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTT 347 | || | ||| |||||||| |||| |||||| | || |||||||||| | | Sbjct 253951 TCCTAATCAAAACATAAGAGCACCCCTCCTCCAAAAGTTAGGAGGCCATTTTGCCGCGCT 253892 Query 348 CCTT 351 |||| Sbjct 253891 CCTT 253888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062376818432