Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq419 145 2e-32 seq222 113 1e-22 seq228 86.0 1e-14 >seq419 Length=401485 Score = 145 bits (160), Expect = 2e-32 Identities = 110/130 (85%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 69 ATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTG 128 ||||||||||||||||||| |||||||||||| |||||||||| | |||||||| ||| Sbjct 130320 ATATTCCCCACTGCTGCCTACCGTAGGAGTCTAGACCGTGTCTTGATCCCAGTGTGGCTG 130379 Query 129 ATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAG 188 ||||||||||| |||| ||| |||| || |||||| ||| ||| ||||||||||||| Sbjct 130380 ATCATCCTCTCGAACCAACTACTGATCATCAACTTGGTAAGCTATTGCCTCACCAACTAG 130439 Query 189 CTAATCCGAC 198 |||| | ||| Sbjct 130440 CTAACCGGAC 130449 Score = 145 bits (160), Expect = 2e-32 Identities = 110/130 (85%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 69 ATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTG 128 ||||||||||||||||||| |||||||||||| |||||||||| | |||||||| ||| Sbjct 358372 ATATTCCCCACTGCTGCCTACCGTAGGAGTCTAGACCGTGTCTTGATCCCAGTGTGGCTG 358313 Query 129 ATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAG 188 ||||||||||| |||| ||| |||| || |||||| ||| ||| ||||||||||||| Sbjct 358312 ATCATCCTCTCGAACCAACTACTGATCATCAACTTGGTAAGCTATTGCCTCACCAACTAG 358253 Query 189 CTAATCCGAC 198 |||| | ||| Sbjct 358252 CTAACCGGAC 358243 >seq222 Length=596275 Score = 113 bits (124), Expect = 1e-22 Identities = 102/127 (80%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||||||||| | ||||| | || ||||| |||| ||||||||||||||||| ||| ||| Sbjct 283990 TCAGGCTTT-GTCCATTATGGAAAATTCCACACTACTGCCTCCCGTAGGAGTTTGGCCCG 283932 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 ||||||| ||||| |||| || ||| |||||| |||||| ||| || | |||||||| Sbjct 283931 TGTCTCAATTCCAATGTGGTTGGTCACCCTCTCGGACCAGCTACTGACTATTGCCTTGGT 283872 Query 167 GAGCCAT 173 ||| || Sbjct 283871 AAGCTAT 283865 >seq228 Length=592671 Score = 86.0 bits (94), Expect = 1e-14 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 97 GTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCG 156 |||||| || ||||||||| ||| ||| |||||||||| ||| |||| ||| |||| Sbjct 206430 GTCTGGGCCATGTCTCAGTCCCAATGTTGTTGATCATCCTTTCATACCAACTACTGATCA 206371 Query 157 TCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 || |||| || ||| || ||||||||||||| |||| Sbjct 206370 TCACCTTAGTAAGCTATCGCCTCACCAACTAGGTAAT 206334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071976608960