Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq266 86.0 2e-14 seq18 78.8 3e-12 >seq266 Length=540792 Score = 86.0 bits (94), Expect = 2e-14 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 139 TGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCC 198 ||| ||| ||||||||||| ||||||||| ||| | | |||| || ||| ||||||| Sbjct 79028 TGCGCCTCAATGCATTTCGAGGAGAACCAACTAGCTCTGAGTTCGAGCGGCATTTCACCT 78969 Query 199 CTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCT 258 ||| ||||| |||||| || | | ||||| | ||| | || | | | ||| || | Sbjct 78968 CTAACCACAACTCATCCACTGATTACTCAACATCAGTCGATTTGAACATTCACTTAGTTT 78909 Query 259 TACCCGCGCTTCAACCTGCCCATGGATAGATCACTTC 295 || | |||||| | || |||||||| ||||| || Sbjct 78908 CACTCAAGCTTCATCTTGATCATGGATAAATCACCTC 78872 >seq18 Length=1529051 Score = 78.8 bits (86), Expect = 3e-12 Identities = 109/153 (71%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 93 CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCA 152 |||||| |||| |||||||||||| || | ||| | || || || |||| | Sbjct 470627 CCCTAGCCCATTGAGTGCTCTACCTAAGGCCATCGACATCCTACACTCTACTAAAATAAA 470686 Query 153 TTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCA 212 ||||| || ||||| |||| | | ||| ||| |||||||| ||| ||||| |||| Sbjct 470687 TTTCGCAGAAAACCAACTATATCCTATCTTGGTTGACCTTTCACTTCTAGCCACAAGTCA 470746 Query 213 TCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTC 245 ||| | | ||||| || || |||| ||||||| Sbjct 470747 TCCTCATATTTTTCCACATACGTGGATTCGGTC 470779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817560339968