Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq419 118 2e-24 seq222 95.1 2e-17 seq228 78.8 2e-12 >seq419 Length=401485 Score = 118 bits (130), Expect = 2e-24 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 35 ATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCG 94 |||| |||||||||||||| |||||||||||| | |||||||| ||||| |||||| | Sbjct 130320 ATATTCCCCACTGCTGCCTACCGTAGGAGTCTAGACCGTGTCTTGATCCCAGTGTGGCTG 130379 Query 95 TTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTAC 154 ||| |||||| || |||| |||| || |||||| |||||| ||||||||||| Sbjct 130380 ATCATCCTCTCGAACCAACTACTGATCATCAACTTGGTAAGCTATTGCCTCACCAACTAG 130439 Query 155 CTAATCGGCCGCG 167 |||| ||| |||| Sbjct 130440 CTAACCGGACGCG 130452 Score = 118 bits (130), Expect = 2e-24 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 35 ATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCG 94 |||| |||||||||||||| |||||||||||| | |||||||| ||||| |||||| | Sbjct 358372 ATATTCCCCACTGCTGCCTACCGTAGGAGTCTAGACCGTGTCTTGATCCCAGTGTGGCTG 358313 Query 95 TTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTAC 154 ||| |||||| || |||| |||| || |||||| |||||| ||||||||||| Sbjct 358312 ATCATCCTCTCGAACCAACTACTGATCATCAACTTGGTAAGCTATTGCCTCACCAACTAG 358253 Query 155 CTAATCGGCCGCG 167 |||| ||| |||| Sbjct 358252 CTAACCGGACGCG 358240 >seq222 Length=596275 Score = 95.1 bits (104), Expect = 2e-17 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 25 CCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCC 84 ||||| || || || || |||| ||||||||||||||||| ||| |||||||||| | || Sbjct 283979 CCATTATGGAAAATTCCACACTACTGCCTCCCGTAGGAGTTTGGCCCGTGTCTCAATTCC 283920 Query 85 AATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTAT 139 ||||||| | ||| |||||| | || ||||| || | | |||||| ||||| Sbjct 283919 AATGTGGTTGGTCACCCTCTCGGACCAGCTACTGACTATTGCCTTGGTAAGCTAT 283865 >seq228 Length=592671 Score = 78.8 bits (86), Expect = 2e-12 Identities = 85/113 (75%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 63 GTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCG 122 ||||||||| ||||||||||||||||| | | ||| ||| ||| || |||| |||| Sbjct 206430 GTCTGGGCCATGTCTCAGTCCCAATGTTGTTGATCATCCTTTCATACCAACTACTGATCA 206371 Query 123 TCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 || ||| || ||||| ||||||||||| |||| | | ||||||| || Sbjct 206370 TCACCTTAGTAAGCTATCGCCTCACCAACTAGGTAATTAGACACGAGCCCTTC 206318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998378214912