Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq1365 95.1 1e-17 seq231 73.4 3e-11 >seq1365 Length=65459 Score = 95.1 bits (104), Expect = 1e-17 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 42 GGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAA 101 ||||| ||||| ||| | | | || ||| |||| | |||||||| || ||| Sbjct 2473 GGATTCGCTCCACCTTACAGCCTTGCTTCCCATTGTAATTGCCATTGTAGCACATGTATG 2414 Query 102 GCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||| ||||||||||||||| |||||||||||||||||||||||||||| || | |||| Sbjct 2413 GCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 2354 >seq231 Length=587281 Score = 73.4 bits (80), Expect = 3e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| | |||||||| || |||| |||| |||||||||||||||| | |||||| Sbjct 385507 TGTAATTGCCATTGTAGCACATGTGTGGCCCAACCCATAAGGGCCATGTGAACTTGA-TA 385449 Query 135 CATCCCCACCTTCCTCC 151 ||||||||||||||||| Sbjct 385448 CATCCCCACCTTCCTCC 385432 Score = 73.4 bits (80), Expect = 3e-11 Identities = 63/77 (82%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| | |||||||| || |||| |||| |||||||||||||||| | |||||| Sbjct 419775 TGTAATTGCCATTGTAGCACATGTGTGGCCCAACCCATAAGGGCCATGTGAACTTGA-TA 419833 Query 135 CATCCCCACCTTCCTCC 151 ||||||||||||||||| Sbjct 419834 CATCCCCACCTTCCTCC 419850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415991206540