Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq419 125 2e-26 seq222 116 9e-24 >seq419 Length=401485 Score = 125 bits (138), Expect = 2e-26 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 70 ATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTG 129 ||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||| Sbjct 130320 ATATTCCCCACTGCTGCCTACCGTAGGAGTCTAGACCGTGTCTTGATCCCAGTGTGGCTG 130379 Query 130 GTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAG 189 |||||||||| |||| ||| |||| || || ||| || ||| || | |||||||| Sbjct 130380 ATCATCCTCTCGAACCAACTACTGATCATCAACTTGGTAAGCTATTGCCTCACCAACTAG 130439 Query 190 CTAA 193 |||| Sbjct 130440 CTAA 130443 Score = 125 bits (138), Expect = 2e-26 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 70 ATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTG 129 ||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||| Sbjct 358372 ATATTCCCCACTGCTGCCTACCGTAGGAGTCTAGACCGTGTCTTGATCCCAGTGTGGCTG 358313 Query 130 GTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAG 189 |||||||||| |||| ||| |||| || || ||| || ||| || | |||||||| Sbjct 358312 ATCATCCTCTCGAACCAACTACTGATCATCAACTTGGTAAGCTATTGCCTCACCAACTAG 358253 Query 190 CTAA 193 |||| Sbjct 358252 CTAA 358249 >seq222 Length=596275 Score = 116 bits (128), Expect = 9e-24 Identities = 96/116 (83%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 35 CGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTA 94 ||||| || | |||||||| | ||||| || || ||||| |||| |||||||||||| Sbjct 284003 CGGCAAACCTCCGTCAGGCTTT-GTCCATTATGGAAAATTCCACACTACTGCCTCCCGTA 283945 Query 95 GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 ||||| ||| |||||||||| ||||| ||||| |||||| |||||| ||||||||| Sbjct 283944 GGAGTTTGGCCCGTGTCTCAATTCCAATGTGGTTGGTCACCCTCTCGGACCAGCTA 283889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222373327232