Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1100 98.7 3e-18 seq141 93.3 1e-16 seq1140 77.0 1e-11 seq861 77.0 1e-11 seq165 75.2 4e-11 >seq1100 Length=112111 Score = 98.7 bits (108), Expect = 3e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| || |||||||||| |||||||| |||||||| ||||||| | ||||||||| Sbjct 31740 TCGTTACACCTTTCGTGCAGGACGGAACTTCCCCGACAAAGAATTTCACAACCTTAGGAC 31681 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| |||| || || || ||||| Sbjct 31680 CGTTATAGTTACGGTCGCCATTCACGGGAGCTTC 31647 >seq141 Length=802350 Score = 93.3 bits (102), Expect = 1e-16 Identities = 100/130 (77%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | | ||||||| | || ||||||| | |||||| |||| | Sbjct 800127 ATTTCACCGAGCCTCTTTTCGAGACAGT-GCCTAGATCGTTACTTCTTTCGTGTAGGTTG 800185 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||| ||| |||| |||||| ||||||||||| |||||||||| | ||| || | Sbjct 800186 GAACTTATCCGTCAAGAAATTTCACTACCTTAGGACTGTTATAGTTATGGCTGCCATTCA 800245 Query 470 CTGGGGCTTC 479 | ||||||| Sbjct 800246 CCAGGGCTTC 800255 >seq1140 Length=103875 Score = 77.0 bits (84), Expect = 1e-11 Identities = 73/92 (79%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447 |||||||| ||| |||||||| |||||| | |||||||||| | |||||||| || | Sbjct 20845 GTTACGCCTTTCATGCAGGTCAAAACTTATCTAACAAGGAATTACACTACCTTAAGACCG 20904 Query 448 TTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||||| | || || ||| ||||||| Sbjct 20905 TTATAGTTACAGTCACCATTCACT-GGGCTTC 20935 >seq861 Length=170059 Score = 77.0 bits (84), Expect = 1e-11 Identities = 73/92 (79%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447 |||||||| ||| |||||||| |||||| | |||||||||| | |||||||| || | Sbjct 142392 GTTACGCCTTTCATGCAGGTCAAAACTTATCTAACAAGGAATTACACTACCTTAAGACCG 142451 Query 448 TTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||||| | || || ||| ||||||| Sbjct 142452 TTATAGTTACAGTCACCATTCACT-GGGCTTC 142482 >seq165 Length=715179 Score = 75.2 bits (82), Expect = 4e-11 Identities = 60/71 (85%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| | || ||| |||||||||||| |||||||||||||| |||||||||||| Sbjct 395920 TCGTTACACGTTTAATGCGGGTCGGAACTTAGCCGACAAGGAATTT-GCTACCTTAGGAC 395862 Query 446 GGTTATAGTTA 456 ||||| |||| Sbjct 395861 CGTTATTGTTA 395851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702362853632