Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq222 100 4e-16 >seq222 Length=596275 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 189478 GAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACG 189537 |||||||| |||| || || || | |||||||| ||||| ||||| ||| |||| Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828 Query 189538 TACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGCATCGTTC 189597 ||||| ||||| |||| |||||| ||||| || | | ||||| |||||||| ||| Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888 Query 189598 AACAACTCCCGTTCACTTCACTTCTTCCTCGCT 189630 || || | ||||| | ||||||||||| ||| Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGCT 106921 Score = 100 bits (110), Expect = 4e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 189478 GAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACG 189537 |||||||| |||| || || || | |||||||| ||||| ||||| ||| |||| Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783 Query 189538 TACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGCATCGTTC 189597 ||||| ||||| |||| |||||| ||||| || | | ||||| |||||||| ||| Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723 Query 189598 AACAACTCCCGTTCACTTCACTTCTTCCTCGCT 189630 || || | ||||| | ||||||||||| ||| Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGCT 179690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634062705468000