Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_031922.1
Length=174830
Score E
Sequences producing significant alignments: (Bits) Value
seq157 132 5e-26
seq222 107 2e-18
seq316 87.8 2e-12
>seq157
Length=750868
Score = 132 bits (146), Expect = 5e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 164334 CAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTTG 164393
|| |||||||||||||||| ||| ||||| || || || || || ||||| ||||
Sbjct 399153 CAGTCTAGTTGGTTCTTTGTGCCCAATTTTGGTGTAGCAGCTATATTTTGATTCATCTTT 399212
Query 164394 TTCCT-CCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452
|| | |||||| || ||||| || ||| | ||| | || ||||||||||| |||| |
Sbjct 399213 TTTTTTCCAAGGGTTTCATAATTGAACATTGAACTCATTTCATATGATGGGAGTTGTTGA 399272
Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512
| || | |||||| | || ||||||||||||||||| ||||| ||||||| ||
Sbjct 399273 AGTGTAGGGCGTTGCTCTGTTATGCGCTATTCATGGTGCTACTGTAGAAGATACTTTATT 399332
Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAG 164562
||||||| |||| ||||||| ||| | || || | || |||||||
Sbjct 399333 TGAAGATAGTGATGGTGCAAATACATTCCATGC-TTTAACCCAACTCAAG 399381
>seq222
Length=596275
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 161199 GAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 161258
|||||||| || || || || || | |||||||| ||||| ||||| ||| | |||
Sbjct 106769 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 106828
Query 161259 TACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 161318
||||| ||||| |||| ||||||||| || || | ||||||| ||||| ||| |||
Sbjct 106829 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 106888
Query 161319 AACAACTCCCGTTCGTTGCACTTCTTCCTCGC 161350
|| || | ||||| || ||||||||||| ||
Sbjct 106889 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 106920
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 161199 GAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 161258
|||||||| || || || || || | |||||||| ||||| ||||| ||| | |||
Sbjct 179842 GAAACCACAGAAAATGAATCTACCAATGAAGGTTACAAATTTGGGCAAGAGGAAAAAACC 179783
Query 161259 TACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 161318
||||| ||||| |||| ||||||||| || || | ||||||| ||||| ||| |||
Sbjct 179782 TACAATATCGTAGCTGTTCATGGTTATTTTGGCTGATTGATCTTTCAATATGCTAGTTTC 179723
Query 161319 AACAACTCCCGTTCGTTGCACTTCTTCCTCGC 161350
|| || | ||||| || ||||||||||| ||
Sbjct 179722 AATAATTGTCGTTCTTTACACTTCTTCCTAGC 179691
>seq316
Length=488290
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 164433 CATATGATGGGTGTTGCAGGCATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCT 164492
||||||||||| ||||| | | | || | |||||| | || |||||||||| ||||
Sbjct 122879 CATATGATGGGAGTTGCTAGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGATGCT 122820
Query 164493 ACCGTAGAGAATACTTTGTTTGAAGATGGTGAACAATCAAATACTTTC 164540
|||| ||| |||||||| |||||||||||||| ||||||| |||
Sbjct 122819 ACCGCAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACGTTC 122772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559312744328800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |