Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8536 298 9e-79 seq4931 298 9e-79 seq1970 298 9e-79 seq3817 284 2e-74 seq84 282 7e-74 seq631 269 4e-70 seq10593 268 1e-69 seq5739 264 2e-68 seq2856 262 6e-68 seq9719 228 1e-57 seq4726 183 5e-44 seq12104 179 6e-43 seq6118 161 2e-37 seq3112 136 6e-30 seq613 118 2e-24 seq1235 98.7 2e-18 seq8972 87.8 3e-15 >seq8536 Length=56880 Score = 298 bits (330), Expect = 9e-79 Identities = 227/263 (86%), Gaps = 10/263 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42084 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 42025 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 42024 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCTATAGTCCCTCTAAGAAGCTGG 41967 Query 120 CCACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 || | | || || || | ||| |||||||| | ||||||||||||||| ||| Sbjct 41966 CCGCGGAGGGTCACCTCCGCATAG--CTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGG 41909 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41908 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 41849 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| ||| |||||| Sbjct 41848 CAAGAAAGAGCTCTCAGTCTGTC 41826 >seq4931 Length=248149 Score = 298 bits (330), Expect = 9e-79 Identities = 227/263 (86%), Gaps = 10/263 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 93983 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 94042 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 94043 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 94100 Query 120 CCACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 || | | || || || | ||| |||||||| | ||||||||||||||| ||| Sbjct 94101 CCGCGGAGGGTCACCTCCGCATAG--CTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGG 94158 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94159 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 94218 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| ||| |||||| Sbjct 94219 CAAGAAAGAGCTCTCAGTCTGTC 94241 Score = 295 bits (326), Expect = 1e-77 Identities = 223/259 (86%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 84478 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCATAACATCTAAGGGCATCACAGAC 84419 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTG-GAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||| | | || | ||||| |||| ||||||||||| ||| Sbjct 84418 CTGTTATTGCCTCAAACTTCCTTGGCCTAAGCAGCCA-TAGTTTCTCTAAGAAGCTGGCC 84360 Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | || || |||| |||||||| ||||||||||||||||| ||||||| Sbjct 84359 GCGGAGGGTCACCTCCATATAGCTAGTTAGCAGGCTAAGGTCTCGTTCGTTAACGGAATT 84300 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 84299 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 84240 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| ||| |||||| Sbjct 84239 AAAGAGCTCTCAGTCTGTC 84221 Score = 282 bits (312), Expect = 7e-74 Identities = 221/261 (85%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 90508 ACTCGTTGAATACATCAATGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCATAGA 90567 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||| ||||||||| | | || || | |||||||||||||||||| ||| Sbjct 90568 CCTGTTATTGCCACAAACTTCCTTGGCCTAAGAGGCCATAGTCCCTCTAAGAAGCTGGCC 90627 Query 122 ACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | | || || || | ||| |||||||| | ||||||||||||||| ||||| Sbjct 90628 GCGGAGGGTCACCTCCGCATAG--CTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 90685 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 90686 TTAACCAGACAAATCACTCCACCAACTAAGAACGGTCATGCACCACCACCCATAGAATCA 90745 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 90746 AGAAAGAGCTCTCAGTCTGTC 90766 >seq1970 Length=50579 Score = 298 bits (330), Expect = 9e-79 Identities = 227/263 (86%), Gaps = 10/263 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 47013 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 47072 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 47073 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 47130 Query 120 CCACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 || | | || || || | ||| |||||||| | ||||||||||||||| ||| Sbjct 47131 CCGCGGAGGGTCACCTCCGCATAG--CTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGG 47188 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 47189 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 47248 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| ||| |||||| Sbjct 47249 CAAGAAAGAGCTCTCAGTCTGTC 47271 Score = 163 bits (180), Expect = 5e-38 Identities = 95/98 (97%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18383 CTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 18442 Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||| ||| |||||| Sbjct 18443 CACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 18480 >seq3817 Length=113315 Score = 284 bits (314), Expect = 2e-74 Identities = 223/262 (85%), Gaps = 10/262 (4%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | | |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 80657 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGACCATCTAAGGGCATCACAGAC 80716 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||| | | || |||| | |||||||||||||||||| || Sbjct 80717 CTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGGC 80774 Query 121 CACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | | | || || || | ||| |||||||| | ||||||||||||||| |||| Sbjct 80775 CGCGGAGGGTCACCTCCGCATAG--CTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGA 80832 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 80833 ATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 80892 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||| ||| | |||| Sbjct 80893 AAGAAAGAGCTCTCATTTTGTC 80914 >seq84 Length=90702 Score = 282 bits (312), Expect = 7e-74 Identities = 221/261 (85%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 45973 ACTCGTTGAATACATCAGTGTAGCGCGCTTGCGGCCCAGAACATCTAAGGGCATCACAGA 46032 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 46033 CCTGTTATTGCCTCAAACTTCCTTAGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 46090 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | | | || |||| |||||||| | ||||||||||||||| ||||| Sbjct 46091 CCGCGCAGGGTCACCTCTGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 46150 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 46151 TTAACCTGACAAATCACTCTACTAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 46210 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 46211 AGAAAGAGCTCTCAGTCTGTC 46231 >seq631 Length=233705 Score = 269 bits (298), Expect = 4e-70 Identities = 222/270 (82%), Gaps = 24/270 (9%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||| ||| ||| ||||||||||||||||||||||||||| Sbjct 9214 ACTCGTTGAATACATCAGTGTAGCACGCATGCAGCCCAGAACATCTAAGGGCATCACAGA 9273 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 ||||||||||||||||| |||| | | || |||| | |||||||||||||||||| | Sbjct 9274 CCTGTTATTGCCTCAAAATTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 9331 Query 120 C----------CACCAAC-CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCG 168 | |||| | ||||| ||| |||||||| | |||||||||||| Sbjct 9332 CAGTGGAGGGTCACCTCCGCATAG---------CTAGTTAGCAGGCTGAGGTCTCGTTCG 9382 Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9383 TTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 9442 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||||||||||||||||||| ||| || Sbjct 9443 ACAGAATCAAGAAAGAGCTATCAGTCTATC 9472 >seq10593 Length=48225 Score = 268 bits (296), Expect = 1e-69 Identities = 213/251 (85%), Gaps = 10/251 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 33993 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGTATCACAGA 33934 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 33933 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 33876 Query 120 CCACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 ||| | || || || | ||| |||| ||||| |||||| |||||||| ||| Sbjct 33875 CCATGGAGGGTCACCTCCGCATAG--CTAGTTAGTAGGTTGAGGTCTAGTTCGTTAACGG 33818 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 33817 AATTAACCAGACAAATCACTCCACCAACTAAGAACGACCATGCACCACCACCCATAGAAT 33758 Query 236 CAAGAAAGAGC 246 ||||||| ||| Sbjct 33757 CAAGAAAAAGC 33747 >seq5739 Length=107719 Score = 264 bits (292), Expect = 2e-68 Identities = 220/262 (84%), Gaps = 9/262 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||| || ||||||||||||||| ||||||||||||||| Sbjct 57026 ACTCGTTGAATACATCAGTGTAGCATGCATGCGGCCCAGAACAT-TAAGGGCATCACAGA 56968 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGA-AGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||||||||||||||| | | || | ||||| ||||||||||||||||| ||| Sbjct 56967 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACAGCCA-TAGTCCCTCTAAGAAGCTAGC 56909 Query 121 CACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 || | || || || | ||| |||||||| ||||||||||||||||| | || Sbjct 56908 CATGGAGGGTCACCTCCGCATAG--CTAGTTAGCAGGCTAAGGTCTCGTTCGTTAACAGA 56851 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 56850 ATTAACCAGATAAATCACTCCACCAACTAAGAACGGCAATGCACCACCACCCATAAAATC 56791 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||| || |||||| Sbjct 56790 AAGAAAGAGCTCCCAGTCTGTC 56769 >seq2856 Length=133587 Score = 262 bits (290), Expect = 6e-68 Identities = 219/263 (83%), Gaps = 10/263 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 48173 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAAGGCATCACAGA 48232 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 ||||||||| |||||||||||| | | || |||| | ||||||||| |||||||| Sbjct 48233 CCTGTTATTTCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTTTAAGAAGCTGA 48290 Query 120 CCACCAAC---CATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 || | | || || || | ||| |||| ||| | ||||||||||||||| ||| Sbjct 48291 CCGCGCAGGGTCACCTCCGCATAG--CTAGTTAGTAGGCTGAGGTCTCGTTCGTTAACGG 48348 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 48349 AATTAACCTGACAAATCACTCCACTAACTAAGAACGGCCATGCACCACCACCCATAGAAT 48408 Query 236 CAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| ||| ||| || Sbjct 48409 CAAGAAAGAGCTCTCAGTCTATC 48431 Score = 131 bits (144), Expect = 3e-28 Identities = 77/80 (96%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112382 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 112441 Query 238 AGAAAGAGCTATCAATCTGT 257 |||||||||| ||| || || Sbjct 112442 AGAAAGAGCTCTCAGTCCGT 112461 >seq9719 Length=51888 Score = 228 bits (252), Expect = 1e-57 Identities = 203/252 (81%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||| ||| ||||| ||||||| ||||||||||||| Sbjct 51280 ACTCGTTGAATACATCAGTGTAGCGCGCATGCAGCCCAAAACATCTGAGGGCATCACAGA 51339 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||| |||||||||| ||||||| | | || | | | ||||| |||| ||||||| ||| Sbjct 51340 CCTATTATTGCCTCCAACTTCCTTGGCCTAAACGGCCATAGTTCCTCAAAGAAGCTGGCC 51399 Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | || | |||| |||| ||||| ||||||| ||| ||| | |||| Sbjct 51400 ACGGAGGGTTACCTCCGTATAGCTAGTTAGTAGGTTGAGGTCTCATTCATTAATGAAATT 51459 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 51460 AACCAGACAAATCACTCCACCAACTAAGAATGGCCATGCACCAC--CCCATAGAATCAAG 51517 Query 240 AAAGAGCTATCA 251 |||||| ||||| Sbjct 51518 AAAGAGATATCA 51529 >seq4726 Length=66208 Score = 183 bits (202), Expect = 5e-44 Identities = 195/252 (77%), Gaps = 14/252 (6%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 || ||||||| || ||| | | ||||||||||| ||||||||| |||| | ||||| | Sbjct 10388 GTTAGTGTAGTGCAAGTGTAGTCAAGAACATCTAAAGGCATCACAAACCTATAATTGCGT 10447 Query 75 CAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAGCCACCA------A 126 |||||||| |||| || | | |||||||||||||||| | ||| | | Sbjct 10448 CAAACTTC--TTGGGCCTAATCGGCCATAGTCCCTCTAAGAAACTGGCCGCGGGAGGTCA 10505 Query 127 CCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 || | || || | ||| |||||| | | |||||| || | || |||||||||||||| Sbjct 10506 CC-TCCTC-ATAG--CTAGTTAGCAAGCTGAGGTCTTATTTGCTAACGGAATTAACCAGA 10561 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| | Sbjct 10562 CAAATCACTCCACCAATTAAGAACGGCCATACACCATCACCCATAGAATCAAGAAAGACC 10621 Query 247 TATCAATCTGTC 258 ||| | |||||| Sbjct 10622 TATTAGTCTGTC 10633 >seq12104 Length=5745 Score = 179 bits (198), Expect = 6e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 4231 CTATTTAGTAGGTGAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 4290 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 4291 ACTAAGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAGCTCTCAATCTGTC 4347 Score = 91.5 bits (100), Expect = 2e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 5 CGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 64 || |||| | |||||||||| |||||||||||| | ||||||||||||||||||||||| Sbjct 3981 CGATGGCCACTTCAGTGTAGCACGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCT 4040 Query 65 GTTATTGC 72 |||||||| Sbjct 4041 GTTATTGC 4048 >seq6118 Length=43452 Score = 161 bits (178), Expect = 2e-37 Identities = 94/97 (97%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 43035 TCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 42976 Query 222 ACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||| ||| |||||| Sbjct 42975 ACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 42939 >seq3112 Length=203282 Score = 136 bits (150), Expect = 6e-30 Identities = 150/192 (78%), Gaps = 11/192 (6%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||| |||||||||||||||||||||| ||||||| || Sbjct 38199 ACTCGTTGAATACATCAGTGTAGTATGCGTGCGGCCCAGAACATCTAAAGGCATCATAGG 38258 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||| ||||||| ||||| |||| | |||||||||||||||||| || Sbjct 38259 CCTGTTATTGCCTC-AACTTCC-TTGGC-CTAAGCGGCCATAGTCCCTCTAAGAAGCTAG 38315 Query 120 CCACCAA---CCATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175 || | || || || |||| ||||||| || |||||||||| |||| ||| Sbjct 38316 CCGTAGAGGGTCACCTCCGCAT--AGCTAGTTAGCAGATTGAGGTCTCGTTTGTTAACGG 38373 Query 176 AATTAACCAGAC 187 ||||||||| || Sbjct 38374 AATTAACCATAC 38385 >seq613 Length=48131 Score = 118 bits (130), Expect = 2e-24 Identities = 97/116 (84%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||| || ||| |||| ||||||||||||||||||||||| Sbjct 114 ACTCGTTGAATACATCAGTGTAGCCCGTGTGTGGCCTAGAACATCTAAGGGCATCACAGA 55 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAG 115 | |||||||||||||||||||| | | || |||| | || |||||||||||||| Sbjct 54 CTTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATGGTCCCTCTAAGAAG 1 >seq1235 Length=184591 Score = 98.7 bits (108), Expect = 2e-18 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| | Sbjct 24260 ATCACTCCACCAACTAAGAACGGCCATGCACCACTATAAATAGAATCAAGAAAGTGCTCT 24319 Query 250 CAATCTGTC 258 ||||||||| Sbjct 24320 CAATCTGTC 24328 >seq8972 Length=76114 Score = 87.8 bits (96), Expect = 3e-15 Identities = 88/113 (78%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 || |||||||| | ||| || || |||| | || || | |||||||||||| ||||| Sbjct 66162 TAATTAGCAGGCTGAGGAATCATTTGTTAATGAAAGTAGCTAGACAAATCACTTAACCAA 66221 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 ||||||| | ||||| ||||| ||||||| ||| ||| |||| || | ||||| Sbjct 66222 CTAAGAATGACCATGTACCACTACCCATAAAATTAAG-AAGACCTCTTAATCT 66273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796490035836