Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq4314 100 5e-19 >seq4314 Length=62396 Score = 100 bits (110), Expect = 5e-19 Identities = 118/160 (74%), Gaps = 15/160 (9%) Strand=Plus/Plus Query 116 GACCTTGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAA 175 |||| |||| || ||||| | || ||||| || ||||| ||||| ||| || || Sbjct 49051 GACCCTGGTGACAGGGTCTGAGTACCAAGGTGCACCACAAGGGTT----TTA-TATATT- 49104 Query 176 CAACAAAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTC 235 ||||||||||||| |||||||| | |||| ||| |||||||||||||| Sbjct 49105 ---------GGATGGGCAAAATGGTAAATTGGTCAGGATTAGTGTACCTGATGAATTTTC 49155 Query 236 TGGATTTGTGCAATCTGGATGCTGTGTGGAGATCTGAAAT 275 ||| ||||| ||||| || ||||||||||| || ||| || Sbjct 49156 TGGCTTTGTTCAATCCGGGTGCTGTGTGGAAATTTGATAT 49195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918031207296