Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq21181 89.7 2e-16 seq58126 84.2 1e-14 >seq21181 Length=3028 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1492 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 1550 >seq58126 Length=442 Score = 84.2 bits (92), Expect = 1e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 62 GGAAAAGAAACTAATAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230260178880