Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq10266 122 7e-26
>seq10266
Length=7236
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| ||| ||||||| |||||||||
Sbjct 1639 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 1580
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 1579 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 1520
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 1519 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415739130040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |