Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4 113 3e-23 >seq4 Length=50002108 Score = 113 bits (124), Expect = 3e-23 Identities = 98/118 (83%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||| |||| |||||||| |||||||| | | ||||| ||| || |||||| | Sbjct 27208238 GAACCCAAAAACTTCGATTTCTCATAAGGTGCAGCG-GAGTCCTAAAAGA-AACATCCGC 27208295 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||| |||| |||||| |||||||||||||||||||||| Sbjct 27208296 TGATCCCTGGTCGGCATCAGTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 27208353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278372135640