Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq619 87.8 2e-15 seq397 86.0 7e-15 seq207 86.0 7e-15 seq976 84.2 2e-14 seq851 84.2 2e-14 seq258 78.8 1e-12 seq139 78.8 1e-12 seq952 75.2 1e-11 >seq619 Length=11537 Score = 87.8 bits (96), Expect = 2e-15 Identities = 119/163 (73%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 ||||||||||| || | ||| || |||| ||| || ||| || | | | |||| Sbjct 1270 AAACGGACACAGGTGGGTAGGTAGAGAATACYTAGGGGCGCGAGACAA-CTCTCTCTAAG 1328 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || || Sbjct 1329 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--GGGGG 1386 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 ||||| || ||| || || ||| |||| |||||||||||| Sbjct 1387 TCGCAGTGACCAGGCCCGAGCGACTATTTACCAAAAACACAGG 1429 >seq397 Length=13534 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 7231 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 7290 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 7291 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 7330 >seq207 Length=565375 Score = 86.0 bits (94), Expect = 7e-15 Identities = 83/106 (78%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || || | ||| | || ||| | Sbjct 214572 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGATGCCTCCTCACAAA--G 214515 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAG 185 | || ||||| || ||| || ||| |||||||| ||||||||||| Sbjct 214514 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAG 214469 Score = 73.4 bits (80), Expect = 4e-11 Identities = 81/107 (76%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 83 GGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAG 142 |||||| |||||| | |||||||||||| | | || |||| ||| | || ||| || | Sbjct 132051 GGAACTCGGCAAAGTAGCCCTGTAACTTCAGAAAAAGGGGTGCCTCCTCACAAA--GGGG 131994 Query 143 GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | |||| || ||| |||||||||||| |||||||||||| || Sbjct 131993 GTTGCAGTGACCAGGCTTGGGCAACTGTTTACCAAAAACACAGGTCT 131947 >seq976 Length=16402300 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||| ||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 12164677 TAAGGYACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 12164734 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || || || || ||| || ||| |||||||| |||||||||||| || Sbjct 12164735 GGGGTCGRAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 12164784 >seq851 Length=23697 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| ||||| | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 13908 TAAGGAACTCAGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 13967 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| || ||| ||| || |||||||| |||||||| ||| || Sbjct 13968 --GGTCGCAGTGACCAGGCCCAAGCGACTGTTTACCAAAAACATAGGTCT 14015 >seq258 Length=1454245 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | |||| | || |||||||| ||| || |||| ||| | || ||| || Sbjct 1357690 TAAGGAACTCGACAAAATAGCCTCGTAACTTCAGGAGAAGGGGTGCCTCCTCACAAAGGG 1357631 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 1357630 G--GTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 1357583 >seq139 Length=5950 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/110 (76%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | || |||||||||||| || |||| ||| | || ||| | Sbjct 3326 TAAGGAACTCGGCAAAATAGCCTCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAAG 3385 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| || ||| || ||| ||| |||| |||||||||||| || Sbjct 3386 --GGTCGCAGTGACCAGGCCCGGGCGACTATTTAGCAAAAACACAGGTCT 3433 >seq952 Length=4048949 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | |||| | |||||||||||||||| || |||| ||| | || ||| | Sbjct 2831298 TAAGGAACTCGACAAAATAGCCCTGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 2831241 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || |||| || | | | || |||||||| |||||||||||| || Sbjct 2831240 GGGGTTGCAGTGACCAAGCTCTAGCGACTGTTTACCAAAAACACAGGTCT 2831191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531194962066