Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq397 91.5 1e-16 seq976 89.7 5e-16 seq258 87.8 2e-15 seq950 75.2 1e-11 seq941 75.2 1e-11 seq851 75.2 1e-11 >seq397 Length=13534 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 7363 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 7422 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 7423 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 7457 >seq976 Length=16402300 Score = 89.7 bits (98), Expect = 5e-16 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 12164737 GGTCGRAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 12164796 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 12164797 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 12164842 >seq258 Length=1454245 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 1357630 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 1357571 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 1357570 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 1357525 >seq950 Length=8950308 Score = 75.2 bits (82), Expect = 1e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 ||||| || |||| |||||| |||||||||| ||||||||| || ||| | || Sbjct 5317847 ACCAGTCCCGGGCGATTGTTTACCAAAAACACAGGTCTCTGCAAAGTCGTAAGACCATGT 5317788 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| ||||||||| || |||||||||||| || Sbjct 5317787 ATGGGGGCTGACGCCTGTCCAGTGCCGGAAGGTCAA 5317752 >seq941 Length=10723577 Score = 75.2 bits (82), Expect = 1e-11 Identities = 74/96 (77%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| ||||| |||| ||||||||| || ||| | || Sbjct 2293218 ACCAGGCCCGGGCGACTGTTTACCAAAAATACAGGTCTCTGCAAAGTCGTAAGACCATGT 2293159 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| ||| ||||||| |||||||||||| || Sbjct 2293158 ATGGGGGCTGATGCCTGCCTAGTGCCGGAAGGTCAA 2293123 >seq851 Length=23697 Score = 75.2 bits (82), Expect = 1e-11 Identities = 81/106 (76%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| ||||||| || ||| |||| || Sbjct 13968 GGTCGCAGTGACCAGGCCCAAGCGACTGTTTACCAAAAACATAGGTCTCCACAAAGTCGT 14027 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 14028 AAGACCATGTAT-GGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 14072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476795477999