Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq978 300 3e-79 seq952 127 3e-27 >seq978 Length=8767375 Score = 300 bits (332), Expect = 3e-79 Identities = 222/258 (86%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 |||||| |||||||| | |||||||||| || |||||||| |||| |||||||||||| Sbjct 2090441 AGTAGGACAAAACTAATCCGTCTCATGACAGTTTAAACCCAACTCAAATTCCCTATTAGT 2090382 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||| ||| ||||||| |||| | |||||||| |||||||||| Sbjct 2090381 GGGTGAACAATCCAACACTTGGTGAATTCTACTTCACAA-GATAGGAAAAGCCGACATCA 2090323 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||||| ||| ||||||||| |||||| ||| |||||||||||||||||| Sbjct 2090322 AAGGATCAAAAAGCAATGTCTCTATGAACGTTTGGCTACCATAAGCCAGTTATCCCTGTG 2090263 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 ||| |||||||||||||| |||| ||||||||||| || ||||||||| | ||| |||| Sbjct 2090262 GTATCTTTTCTGGCACCTTTAGCTTCAAATTTCGAAGGTCTAAAGGATTGTCAGGTCACA 2090203 Query 276 CTTTCATGGTTTGTATTC 293 |||||||||| |||||| Sbjct 2090202 TTTTCATGGTTCGTATTC 2090185 >seq952 Length=4048949 Score = 127 bits (140), Expect = 3e-27 Identities = 143/176 (81%), Gaps = 18/176 (10%) Strand=Plus/Plus Query 36 AGTAGGG-TA-AAACTAACCTGTCTC-ATGACGG--TCTAAACCCAGCTCACGTTCCCTA 90 ||||||| || ||||||||||||||| | |||| ||||||||||||||||||| |||| Sbjct 1435249 AGTAGGGCTAGAAACTAACCTGTCTCCACGACGAGCTCTAAACCCAGCTCACGTT-CCTA 1435307 Query 91 TTAGTG-GGTGAACAATCCAAC-GCTT----ACCGAATTCTGCTTCGGTAT-GATAGGAA 143 || | ||||||||||||||| |||| | ||||| |||| || |||||||| Sbjct 1435308 TTGCCGTGGTGAACAATCCAACAGCTTTGCCGCTGAATT-GCCTTCACAATCGATAGGAA 1435366 Query 144 GAG-CCGACATCGAAGGATCAAAAAGCAACGTCG-CTATGAACG--CTTGGCTGCC 195 ||| || || ||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 1435367 GAGCCCCGCAACGAAGGATCAAAAAGCAACGTCGCCTATGAACGCCCTTGGCTGCC 1435422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854391635424