Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq959 107 2e-21 seq142 91.5 2e-16 >seq959 Length=5381930 Score = 107 bits (118), Expect = 2e-21 Identities = 137/183 (75%), Gaps = 7/183 (4%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68 ||| ||||||| || ||||||||| |||||||||| |||| ||| | |||||||| || Sbjct 3724803 ACTATTACTTTAAAGAAATTAGAGTGTTCAAAGCAAGCCTAATCTCTGGATACATTAGCA 3724862 Query 69 TG-GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 || | | |||| ||||| | |||| ||||| ||| || | || | || ||||| Sbjct 3724863 TGAGTACAATA---TAGGATTT-CGGTCCTATTCTGTTGGCCTTCAGAATCGAA-GTAAT 3724917 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| || | ||| ||| |||| | |||| || ||||||||||||||||||||||| Sbjct 3724918 GATTAACAAGGACAGTAAGGGGCATTCATATTTCATAGTCAAAGGTGAAATTCTTGGATT 3724977 Query 188 TAT 190 ||| Sbjct 3724978 TAT 3724980 >seq142 Length=624436 Score = 91.5 bits (100), Expect = 2e-16 Identities = 133/180 (74%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72 |||||||||| ||| ||||| |||||||||| | || |||| | |||||||| ||||| Sbjct 250263 TTACTTTGAAGAAACTAGAGTGTTCAAAGCAAGGCTACGCTCTAGATACATTAGCATGGG 250322 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGT-AGGTTTCTAGGACCGCCCGTA-ATGAT 130 |||| | |||||| | | | ||||| ||| || ||| |||| || ||| ||||| Sbjct 250323 ATAACAATATAGGATTTT-GATCCTATTCTGTTAGCCTTC-AGGATCGGA-GTATATGAT 250379 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | || | || | || |||||| || |||| ||||||||||||||||| ||| Sbjct 250380 TAACAAAGAGAATCAGTGGCAGTAGTATTTCATAGTCAGAGGTGAAATTCTTGGATGTAT 250439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511995144160