Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq397 183 1e-43 seq976 159 1e-36 seq207 143 9e-32 seq619 127 7e-27 seq139 123 8e-26 seq938 122 3e-25 seq979 118 4e-24 seq338 116 1e-23 seq945 114 4e-23 seq970 102 3e-19 seq872 98.7 3e-18 seq943 95.1 4e-17 seq941 84.2 7e-14 seq944 82.4 3e-13 >seq397 Length=13534 Score = 183 bits (202), Expect = 1e-43 Identities = 323/461 (70%), Gaps = 26/461 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 6098 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 6157 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 6158 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 6217 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 6218 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 6275 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 6276 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 6335 Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | || ||| || ||| || || |||||| Sbjct 6336 CCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTTGGGTG 6391 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 ||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 6392 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 6451 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 6452 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 6507 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| |||| |||||| |||||||| ||| || Sbjct 6508 AGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 6547 >seq976 Length=16402300 Score = 159 bits (176), Expect = 1e-36 Identities = 376/562 (67%), Gaps = 43/562 (8%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 11735013 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 11735072 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 11735073 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 11735132 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | || || |||||||||||| Sbjct 11735133 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAAACCAGAGCTAGCTGGTTCTCC 11735192 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| |||||| || Sbjct 11735193 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTATT 11735247 Query 237 ATGGCTAGGGGGTCATTGCGA----CTTACCAAACCATTGCAAACTCCGAATGC------ 286 || | ||| | |||| ||||||| | |||||||| |||| | Sbjct 11735248 TCGG--TGCGGGCC---GCGAGAGCAGTACCAAATCGAGGCAAACTCTGAATACTAGATA 11735302 Query 287 --GCATCAGTTTTACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTCCGT 332 | ||| | || | ||| |||||| ||||| | |||| | | | Sbjct 11735303 TGACCTCAAAATAACGGGGGGTCAAGGTCGGCCAGTGAGACAATGGGGGATAAGCTTCAT 11735362 Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAA 392 | ||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | Sbjct 11735363 CATCAAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA 11735422 Query 393 CTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452 || || || | ||| ||||||| |||| ||| || | |||||||||| | || | Sbjct 11735423 --AAGGAGGTAGGGGTGCAYAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGA 11735479 Query 453 AAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAG 512 |||||||||||| |||||||| || || || ||| || || | |||| |||| Sbjct 11735480 AAGAGTGCGTAATAGCTCACTGATCYAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAG 11735538 Query 513 TTGTCTACCGAAGCAGTGGGAT 534 ||||||||||| |||||| Sbjct 11735539 CGATCTACCGAAGCTATGGGAT 11735560 Score = 145 bits (160), Expect = 3e-32 Identities = 321/477 (67%), Gaps = 35/477 (7%) Strand=Plus/Plus Query 22 GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTA 81 ||| ||| | | |||||||| | |||||||| ||||| ||| ||||||| | ||| Sbjct 12163644 GTCACTGCTTATGGACCCGAACCTCCGTGATCTATCCATGACCACGATGAAGCTTGGGTG 12163703 Query 82 ACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAG 141 | || |||||||||||||| ||| |||||||| ||| || ||||||| ||||| ||| Sbjct 12163704 AAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGTGGATGAGTTGTGGTTAG 12163763 Query 142 GGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGT 201 || ||||| || | ||||| || |||||||||||| |||||| || ||| Sbjct 12163764 GGATGAAATGCCACTCAAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCA 12163823 Query 202 GCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTTATGGCTAGGG-GGTCATTGC 255 || ||| | || |||| |||||| ||||||||| || ||| | | || Sbjct 12163824 GC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGC 12163878 Query 256 GACTTACCAAACCATTGCAAACTCCGAATGC--------GCATCAGTTTTACCGCGG--- 304 | ||||||| | |||||||| |||| | | ||| | | | || Sbjct 12163879 G--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCTCAAAATAATAGGGGTCA 12163936 Query 305 --------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 |||||| ||||| | |||| | | | | ||||||| || | ||| | Sbjct 12163937 AGGTCGGCCAGTGAGATGATGGGGGATAAGCTTCATCCTCGAGAGGGAAACAGCCCGAAT 12163996 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | || |||||||||| ||||||| ||| ||| | | || || || | ||| |||| Sbjct 12163997 GACCAACTAAGGCCCCTAAATGACCGCTCAGTGATA--AAYGAGGTAGGGGTGCAGAGAC 12164054 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 ||| |||| ||| || | |||||||| | | || ||||||||||||| |||||||| Sbjct 12164055 AGCCAGGAGGTTTGCCTAGAAGCAGCTA-CCCTTGAAAGAGTGCGTAATAGCTCACT 12164110 Score = 136 bits (150), Expect = 1e-29 Identities = 349/521 (67%), Gaps = 42/521 (8%) Strand=Plus/Plus Query 66 GGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGG 125 |||||||| | ||| | || |||||||||||||| ||| |||||||| ||| || | Sbjct 11648383 GGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCG 11648442 Query 126 GATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGA 185 |||||| ||||| ||||||||||| || | | ||| || ||| |||||||| |||| Sbjct 11648443 GATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGTTGGTTCTCCCCGA 11648502 Query 186 AAACTATTTAGGTAGTGCCTCAAGTATCAC----CATCG-GGGGTAGAGCACTGTTATGG 240 || || |||| || ||| | || |||| |||||| |||||| || Sbjct 11648503 AATGCGTTGAGGTGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTATTT--- 11648554 Query 241 CTAGGGGGTCATTGCGACT--TACCAAACCATTGCAAACTCCGAATGCGC---ATCAGTT 295 | | | || | | || ||||||| | |||||||| |||| | || | | Sbjct 11648555 CAATGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCT 11648614 Query 296 T----TACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAG 339 || | ||| |||||| ||||| | |||| | | | |||| Sbjct 11648615 CAAAATAACAAGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAG 11648674 Query 340 AGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGA 399 ||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || || Sbjct 11648675 AGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGA 11648732 Query 400 AGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTG 459 || | ||| ||||||| |||| ||| |||| |||||||||| | || |||||||| Sbjct 11648733 GGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCTTAGAAGCAGCCA-CCCTTGAAAGAGTG 11648791 Query 460 CGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCT 518 ||||| |||||||| ||||| || ||| || || || ||| |||| ||| Sbjct 11648792 CGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACYGGG--CTAAGCGATCT 11648849 Query 519 ACCGAAGCAGTGGGAT-CATTTATATGATCGGTAGGGGAGC 558 ||||||| ||||||| | ||| |||||||||||||| Sbjct 11648850 GCCGAAGCTGTGGGATGTAAAAATA-CATCGGTAGGGGAGC 11648889 >seq207 Length=565375 Score = 143 bits (158), Expect = 9e-32 Identities = 389/584 (67%), Gaps = 40/584 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | |||| ||| | | |||||||| ||||| Sbjct 215625 CGAGTCTTCATAGGGCAATTGTCACTGCTTAATGACCGGAACCTAGGTGATCTATCCATG 215566 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 |||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 215565 ACCAGGATGAACCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 215506 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| | |||||||||||| Sbjct 215505 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAAAGCTAGCTGGTTCTCC 215446 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 ||||| ||| ||| || | ||| | || |||| ||||| ||||||||| Sbjct 215445 TCGAAATGCATTGAGG-AG---CAACAGT-TGACTAGACATCTAAGGGTAAAGCACTGTT 215391 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 215390 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 215333 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || | || |||||| ||||| | |||| | | | | Sbjct 215332 CCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCATC 215273 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 ||||| || || |||| | ||||||||||||| |||| || || ||| | | || Sbjct 215272 AAGAGGGAAACAACTCGGATCACCAGCTAAGGCCCCTAAATAACCACTCAGTGATA--AA 215215 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || || ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 215214 AGAGGTAGGAGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 215156 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTG 515 |||||||| |||||||| | ||| || || || || ||| ||||| ||| Sbjct 215155 GTGCGTAATAGCTCACTGATTGAGTGCTCTTGCACCGAAGATGAATTGGGTA--AAGCGA 215098 Query 516 TCTACCGAAGCAGTGGGAT-CATTTATATGATCGGTAGGGGAGC 558 ||| |||||| ||||||| | ||| || ||||||||||| Sbjct 215097 TCTGTCGAAGCTGTGGGATGTAAAAATA-CATTGGTAGGGGAGC 215055 >seq619 Length=11537 Score = 127 bits (140), Expect = 7e-27 Identities = 355/537 (66%), Gaps = 38/537 (7%) Strand=Plus/Plus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 || ||||| ||||| | ||||||||| | ||| |||| |||||||||||||| ||| Sbjct 318 GTAATCTATCCATGACTAGGATGAAGTTTGGGTGACACTAAGTGGAGGTCCGAACCGACT 377 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167 |||||||| ||| || |||| || ||||| ||||||||||| ||| | ||| || Sbjct 378 GATGTTGAAGAATCAGCGGATRAGTTGTGGTTAGGGGTGAAATCCTACTCGAACCCAGAG 437 Query 168 ATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGG 222 |||||||||||| |||||| || ||| || ||| | || |||| || Sbjct 438 CTAGCTGGTTCTCCCCGAAATGCGTTCAGGCGCAGC----AGT-TGACTGGACATCTAGG 492 Query 223 GGTAGAGCACTGTTATGGCTAGGGGGTCA-TTGCGACTTACCAAACCATTGCAAACTCCG 281 |||| ||||| ||| | | ||| || | | ||||||| | |||||||| | Sbjct 493 GGTAAAGCACGGTTTCAG--TGCGGGCCACGAGAGCGGTACCAAATCGAGGCAAACTCTG 550 Query 282 AATGC--------GCATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGC 322 ||| | | ||| | | | || |||||| ||||| | Sbjct 551 AATACTAGATATGACCTCAAAATAATAGGGGTCAAGGTTGGCCAGTGAGACAATGGGGGA 610 Query 323 TAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAG 382 |||| | | | |||||| | || | |||| | ||||||||||||| ||||||| | Sbjct 611 TAAGCTTCATCACCGAGARGGAAATAGCTCGGATCACCAGCTAAGGCCCCTAAATGACCG 670 Query 383 CTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGC 442 || ||| | | || || || ||| | ||||| |||| ||| || | |||| ||| Sbjct 671 CTCAGTGATA--AAGGAGGTAGCGGTGCAGAAACAGCCAGGAGGTTTGCCTAGAAGTAGC 728 Query 443 CATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATC 502 | | || ||||||||||||| ||||||||| ||||| || ||| || || | | Sbjct 729 TA-CCCTTGAAAGAGTGCGTAATAGCTCACTAATCGAGCGCTCTTGCGCCGAAGATCAAC 787 Query 503 GGGTATTAAGTTGTCTACCGAAGCAGTGGGAT-CATTTATATGATCGGTAGGGGAGC 558 ||| |||| ||| | ||||| ||||||| | ||| ||||||||| |||| Sbjct 788 GGG-GCTAAGCGATCTGCTGAAGCTGTGGGATGTAAAAATA-CATCGGTAGGTGAGC 842 >seq139 Length=5950 Score = 123 bits (136), Expect = 8e-26 Identities = 363/549 (66%), Gaps = 37/549 (7%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| | |||||||| |||| ||||||||||| | ||| | || ||||| Sbjct 2307 GACCCGAACGTAGGTGATCTATCCATCACCAGGATGAAGCTTGGGTGAAACTAATTGGAG 2366 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 ||| |||| ||| |||||||| |||| | |||||| ||||| ||||||||||| || | Sbjct 2367 GTCTGAACTGACTGATGTTGAAGAATTGGCAGATGAGTTGTGGTTAGGGGTGAAATGCCA 2426 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAA--GTAT 212 | ||| || |||||||||||| |||||| || || | || ||| | | Sbjct 2427 CTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAG---GCGCAGCAATTGACT 2483 Query 213 CACCATC-GGGGGTAGAGCACTGTTATGGCTAGGGG--GTCATTGCGACTTACCAAACCA 269 |||| |||||| ||||||||| | | | | | | | |||| ||||||| | Sbjct 2484 GGACATCTAGGGGTAAAGCACTGTT-TCGATGCGCGCCGCAAGAGCGA--TACCAAATCG 2540 Query 270 TTGCAAACTCCGAATGC--------GCATCAGTTTTACCGCGG-----------GAGTGA 310 ||||| |||| | | ||| | || | || ||||| Sbjct 2541 AGRAAAACTTTGAATACTAGATATGACCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGA 2600 Query 311 GGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCC 370 | ||||| | |||| | | | | ||||| ||| | || || | ||||||||||| Sbjct 2601 GACGATGGGGGATAAGCTTCATCGTCAAGAGG-GAAACAGCCAGATCACCAGCTAAGGCC 2659 Query 371 CCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGG 430 || ||||||| ||| ||| | | || || || | |||| |||||||||||| || | Sbjct 2660 CCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGTTGCAGAGACAGCTAGGAGGTCTG 2717 Query 431 CTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCG 490 | | |||||||||| | || ||||||| ||||| |||||| | ||||| | || || Sbjct 2718 CCTAGAAGCAGCCA-CCCTTGAAAGAGTACGTAATAGCTCATTGATCGAGCACTCTTGCA 2776 Query 491 TGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT-CATTTATATGATCGG 549 || || | |||| |||| | | | ||| | ||||||| | ||| ||||| Sbjct 2777 CCGAAGATGAACGGG-GCTAAGCAATTTGCTGAAACTGTGGGATGTAAAAATA-CATCGG 2834 Query 550 TAGGGGAGC 558 ||||||||| Sbjct 2835 TAGGGGAGC 2843 >seq938 Length=6919174 Score = 122 bits (134), Expect = 3e-25 Identities = 132/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | | |||||||| | |||||||| ||||| |||||||||| Sbjct 5214014 AGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAA 5214073 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || |||||| ||||| | ||| |||||||| ||| || ||||||| Sbjct 5214074 GCTTGGGTGAAACTAAGTGGAGGCCCGAATCGACTGATGTTGAAGAATCAGCGGATGAGT 5214133 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||| ||||||||||| || | | ||| || |||||||||||| |||||| Sbjct 5214134 TGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAA 5214188 Score = 116 bits (128), Expect = 1e-23 Identities = 182/254 (72%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 2084916 AGTGAGACGATGGGGGATAAGCTTCATYGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 2084857 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| ||||||| ||| ||| | | || || || | ||| ||||||| |||| Sbjct 2084856 AGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAGCCAGGAG 2084799 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTC 485 ||| || | |||||||||| | || ||||||||||||| |||||||| ||||| || Sbjct 2084798 GTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTC 2084740 Query 486 GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT-CATTTATATG 544 ||| || || | |||| |||| ||| ||||||| ||||||| | ||| Sbjct 2084739 TTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATA-C 2084682 Query 545 ATCGGTAGGGGAGC 558 |||||||||||||| Sbjct 2084681 ATCGGTAGGGGAGC 2084668 >seq979 Length=5567346 Score = 118 bits (130), Expect = 4e-24 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | | |||||||| | ||||||||| ||||| || ||||||| Sbjct 2971102 AGGGCAATTGTCACTGCTTATGGACCCGAACCTGAGTGATCTATCCATGACCGGGATGAA 2971161 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || |||||||| |||| ||| |||||||| |||||| |||||| Sbjct 2971162 GCTTGGGTGAAACTAAGTGGAGGTCTGAACTGACTGATGTTGAAGAATTAGCTGATGAGT 2971221 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||| ||||||||||| || | ||| || |||||||||||| |||||| Sbjct 2971222 TGTGGTTAGGGGTGAAATGCCACTTGAACCCAGAGCTAGCTGGTTCTCCCCGAAA 2971276 >seq338 Length=1068613 Score = 116 bits (128), Expect = 1e-23 Identities = 332/506 (66%), Gaps = 39/506 (8%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | ||| |||| | |||||||| ||||| Sbjct 549841 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACTCGAACCTGGGTGATCTATCCATG 549900 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 | ||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 549901 ACAAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 549960 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| |||| |||||| || | | || || | |||||||||| Sbjct 549961 AGTGGATGAGTTGTGGTTAGGAGTGAAATGCCACTCGAATCCAGAGTTGGCTGGTTCTCC 550020 Query 182 CCGAAAACTATTTAG-----GTAG-TGCCTCAAGTATCACCATC-GGGGGTAGAGCACTG 234 |||||| || || |||| ||||| | |||| | |||| | ||||| Sbjct 550021 CCGAAATGCGTTAAGGCGCAGTAGTTGCCTGGA-------CATCTAGTGGTAAAACACTG 550073 Query 235 TTATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC------- 286 || || ||| | | ||| ||||||| | |||||||| ||| | Sbjct 550074 TTTCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTRAATACTAGATAT 550131 Query 287 -GCATCA----------GTTTTACCGCGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGC 334 | ||| | | | ||| |||||| |||| | |||| | | | Sbjct 550132 GACCTCAAAACAATAGGGGTCAAGGTCGGCTAGTGAGATAATGGCGGATAAGCTTCATCG 550191 Query 335 CCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACT 394 ||||||| || | | ||| | ||||||||||||| ||||||| | | ||| | | Sbjct 550192 TCGAGAGGGAAATAGCCTGGATCACCAGCTAAGGCCCCTAAATGACCGATCAGTGATA-- 550249 Query 395 AACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAA 454 || || || | ||| ||||||| |||| ||| || | |||||||||| | || ||| Sbjct 550250 AAAGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTAAAA 550308 Query 455 GAGTGCGTAACAGCTCACTAGTCGAG 480 |||||| ||| |||||||| ||||| Sbjct 550309 GAGTGCATAATAGCTCACTGATCGAG 550334 >seq945 Length=13627481 Score = 114 bits (126), Expect = 4e-23 Identities = 359/548 (66%), Gaps = 35/548 (6%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| | |||||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 9989791 GACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 9989732 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 ||| ||||| ||| |||||||| ||| | ||||||| ||||| ||||| ||||| || | Sbjct 9989731 GTCTGAACCAACTGATGTTGAAGAATCATCGGATGAGTTGTGGTTAGGGATGAAATGCCA 9989672 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214 | ||| || |||||||||||| | ||| ||| ||| | | ||| | | Sbjct 9989671 CTCGAACCCAGAGCTAGCTGGTTCTCCCTAAAATGCATTGAGGCA----CAACAGT-TGA 9989617 Query 215 C----CATC-GGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCA 269 | |||| ||| || ||||||||| ||| || || | | ||||||| | Sbjct 9989616 CTAGACATCTAGGGCTAAAGCACTGTTTTGGTGCAGGCCGCA-AGAGTGGTACCAAATCG 9989558 Query 270 TTGCAAACTCCGAATGC--------GCATCAGTTTTACCGCGG----------GAGTGAG 311 |||||||| ||| | | ||| | || | || |||||| Sbjct 9989557 AGGCAAACTCTTAATACTAGATATGACCTCAAAATAACAGGGGTCAAGTCGGCCAGTGAG 9989498 Query 312 GGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCC 371 || || | |||| | | |||||||| || | ||| | | | |||||||||| Sbjct 9989497 ACGATAGGGGGTAAGCTTTATCATCGAGAGGAAAACAGCCCGAATCACCTGCTAAGGCCC 9989438 Query 372 CGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGC 431 | ||||||| || ||| | | || || || | ||| ||| ||| |||| || || Sbjct 9989437 CTAAATGACCACTCAGTGATA--AAGGAGGTAGGGGTGCAGAGATAGCCAGGAGATTTGC 9989380 Query 432 TTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGT 491 | |||||||||| | || ||||||||| ||| |||||||| ||||| | || | Sbjct 9989379 CTAGAAGCAGCCA-CCCTTGAAAGAGTGCATAATAGCTCACTGATCGAGCATTCTTATGC 9989321 Query 492 GGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT-CATTTATATGATCGGT 550 || || | | || ||||| ||| ||||||| ||||||| | ||| ||| || Sbjct 9989320 CGAAGATGAACAGG-GCTAAGTGATCTGCCGAAGCTGTGGGATGTAAAAATA-CATCAGT 9989263 Query 551 AGGGGAGC 558 |||||||| Sbjct 9989262 AGGGGAGC 9989255 >seq970 Length=9310200 Score = 102 bits (112), Expect = 3e-19 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | ||||| || | | |||||| ||||| Sbjct 9300261 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCAAACCTGGGCGATCTATCCATG 9300202 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||| ||| ||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 9300201 ACCAAGATAAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 9300142 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| |||| ||||||||||| || | | ||| || ||||| |||||| Sbjct 9300141 AGCGGATGAGTTGTGTTTAGGGGTGAAATGCCACTCGAACCAAGAGCTAGCTAGTTCTCC 9300082 Query 182 CCGAAA 187 | |||| Sbjct 9300081 CTGAAA 9300076 Score = 89.7 bits (98), Expect = 2e-15 Identities = 108/145 (74%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395 ||||||| || || ||||| | |||||||||||| ||||||| ||| ||| | | | Sbjct 9265299 CGAGAGGGAAATAACCCGGATCACTAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--A 9265242 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | || || | ||| ||| ||| |||| ||| || | |||||| || || || |||| Sbjct 9265241 AGGAGGTAGGGGTGCAGAGATAGCCAGGAGGTTTGCCTAGAAGCACGCACTC-TTGAAAG 9265183 Query 456 AGTGCGTAACAGCTCACTAGTCGAG 480 ||||||||| |||||||| ||||| Sbjct 9265182 AGTGCGTAATAGCTCACTGATCGAG 9265158 >seq872 Length=242293 Score = 98.7 bits (108), Expect = 3e-18 Identities = 329/502 (66%), Gaps = 39/502 (8%) Strand=Plus/Minus Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||||| ||||||||| | ||| | || | |||||||||||| ||| |||||||| | Sbjct 87860 ATGGC-AGGATGAAGCTTGGGTGAAACTAAGTAGAGGTCCGAACCAACTGATGTTGAAGA 87802 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 || | ||| ||| ||||| ||||| ||||| || | | ||| || |||||||||| Sbjct 87801 ATCAAAGGAGGAGTTGTGGTTAGGGATGAAATGCCACTCGAACCCAGAGCTAGCTGGTTC 87742 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACT 233 || |||||| ||| ||| | || ||| | || |||| |||||| |||||| Sbjct 87741 TCCCCGAAATGCATTAAGGCACAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACT 87687 Query 234 GTTATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC------ 286 ||| | ||| | | ||| || |||| |||||||| |||| | Sbjct 87686 GTTTCAGTGCGGGCAGCGAGAGCG--GTATCAAATTGAGGCAAACTCTGAATACTAGATA 87629 Query 287 --GCATCA----------GTTTTACCGCGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTG 333 | ||| ||| | ||| |||||| ||||| | |||| | | | Sbjct 87628 TGACCTCAAAATAAGAGGGTTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATC 87569 Query 334 CCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAAC 393 ||||||| || | ||||| | |||||||||||| ||||||| ||| | | | | Sbjct 87568 GTCGAGAGGGAAACAGCCCGGATCACTAGCTAAGGCCCCTAAATGACCGCTCAATGATA- 87510 Query 394 TAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAA 453 || || || | ||| |||||| |||| ||| || | |||| ||||| | || || Sbjct 87509 -AAGGAGGTAGGGGTGCAGGGACAGCCAGGAGGTTTGCCTAGAAGTAGCCA-CCCTTGAA 87452 Query 454 AGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAG 512 ||||||||| | |||||||| ||||| || || || || || |||| |||| Sbjct 87451 AGAGTGCGTGATAGCTCACTGATCGAGCGCTCTTGCACCGAAGATGAACCGGG--CTAAG 87394 Query 513 TTGTCTACCGAAGCAGTGGGAT 534 ||| ||||||| ||||||| Sbjct 87393 CGATCTGCCGAAGCTGTGGGAT 87372 >seq943 Length=11499313 Score = 95.1 bits (104), Expect = 4e-17 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | ||| |||| | | |||||||| ||||| Sbjct 1588179 CGAGTCTTTATAGGGCAATTGTCACTGCTTATCGACTCGAACCTAGGTGATCTATCCATG 1588120 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | | | | || ||||||||| || || |||||||| ||| Sbjct 1588119 ACCAGGATGAAGCTTGGTTGAAACTAAACCGAGGTCCGAGCCGTCTGATGTTGAAGAATC 1588060 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAA 156 || ||||||| ||||| ||||||||||| || ||| Sbjct 1588059 AGCGGATGAGTTGTGGCTAGGGGTGAAATGCCAAA 1588025 >seq941 Length=10723577 Score = 84.2 bits (92), Expect = 7e-14 Identities = 117/160 (73%), Gaps = 7/160 (4%) Strand=Plus/Minus Query 35 GACCCGAAACCAA----GTGATCTACCCA-TGGCCAGGAT-GAAGGTGCGGTAACACGCC 88 ||||||||||| || ||||| ||| || ||||||| |||| | | | | || Sbjct 2291743 GACCCGAAACCCCTGGGGTAATCTATCCAATGACCAGGATTGAAGCTTGGATGAAACTAA 2291684 Query 89 CTGGA-GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGA 147 |||| |||| ||||| ||| ||||| || ||| || ||||||| ||||| ||||||||| Sbjct 2291683 GTGGAAGGTCTGAACCGACTGATGTTAAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGA 2291624 Query 148 AAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 || || | | ||| || |||||||||||| | |||| Sbjct 2291623 AATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCTGAAA 2291584 >seq944 Length=4242546 Score = 82.4 bits (90), Expect = 3e-13 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||||| |||| ||||| |||| ||||| | || |||| || |||| Sbjct 2381013 GACCCGAAACCAATCTATCTGGCCATGAGCAGGTTGAAGAGAGCTCTAACCGGCATTGGA 2380954 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGG-TGAAAGGC 152 || |||||||||| |||| | ||| | ||||||| || || |||||| |||||||| Sbjct 2380953 GGACCGAACCCACGTATGTGGCAAACTACAGGGATGACTTGCGGCTAGGGGATGAAAGGC 2380894 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTT 194 || ||| | | | ||||| ||| || | ||| ||||| Sbjct 2380893 CAACCAAGATCGTATGTAGCTTGTTTTCCGCAAAATTTATTT 2380852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689583458816