Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq25749 80.6 3e-13 seq320 80.6 3e-13 seq304 80.6 3e-13 seq205 80.6 3e-13 seq25437 78.8 1e-12 seq25694 77.0 4e-12 seq25710 75.2 1e-11 seq25700 73.4 5e-11 >seq25749 Length=1851721 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1851380 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 1851438 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1851439 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1851476 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 891868 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 891810 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| || |||||||| |||| |||| || Sbjct 891809 GGCTTGCTTTGAGCAGTCTAATTTCTTCAAAGTAACAG 891772 >seq320 Length=575 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 135 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 193 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 194 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 231 >seq304 Length=565 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 443 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 501 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 502 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 539 >seq205 Length=465 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 255 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 313 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 314 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 351 >seq25437 Length=263430 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 4/99 (4%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||| ||||| || || |||||| | |||| |||||||||||||| | | |||| Sbjct 47112 CCAACAGAATAG--ACCCAAAATCCTATGATTTTATCCCATGCTAATGTATACAGAGCGT 47169 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | || |||||||| |||||||||||| |||| |||| || Sbjct 47170 AGGCTTGCTTTGAGCACTCTAATTTTTTCAAAGTAACAG 47208 >seq25694 Length=956611 Score = 77.0 bits (84), Expect = 4e-12 Identities = 81/104 (78%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | | |||| | |||| |||||||||||||| | | ||||| Sbjct 76690 CCAACAGAATAGG-ACTGAAATTCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 76632 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 || |||||||| ||||||||||| |||| |||| || |||| Sbjct 76631 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCTGG 76588 >seq25710 Length=1134645 Score = 75.2 bits (82), Expect = 1e-11 Identities = 74/93 (80%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 15 AACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAG 73 |||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| | Sbjct 376221 AACAGAATAGG-ACCAAAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGG 376163 Query 74 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | |||||||| ||||||||||| |||| |||| Sbjct 376162 CTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA 376130 >seq25700 Length=1013978 Score = 73.4 bits (80), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 17 CAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCC 75 || |||||| ||| | |||||| | |||| |||||||||||||| | | ||||| || Sbjct 219169 CAGAATAGG-ACGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCT 219112 Query 76 TGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 |||||||| ||||||||||| |||| |||| || Sbjct 219111 TGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 219078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595051450542