Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq25763 271 2e-70 seq25691 230 6e-58 seq25567 226 7e-57 seq25246 223 8e-56 seq25742 196 1e-47 seq24201 187 6e-45 seq25391 170 5e-40 seq23875 170 5e-40 seq25707 165 2e-38 seq25570 163 7e-38 seq25487 154 4e-35 seq25656 127 5e-27 seq24926 123 6e-26 seq25386 98.7 2e-18 seq25754 84.2 5e-14 seq25552 77.0 8e-12 seq25639 75.2 3e-11 seq24854 73.4 1e-10 >seq25763 Length=163161 Score = 271 bits (300), Expect = 2e-70 Identities = 307/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 107631 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 107572 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 107571 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 107512 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 107511 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 107452 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 107451 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 107403 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 107402 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 107345 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 107344 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 107299 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 107298 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 107252 Score = 271 bits (300), Expect = 2e-70 Identities = 307/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 145182 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 145241 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 145242 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 145301 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 145302 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 145361 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 145362 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 145410 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||| ||| | ||||||| |||| Sbjct 145411 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCA 145468 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 145469 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 145514 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 145515 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 145561 >seq25691 Length=910092 Score = 230 bits (254), Expect = 6e-58 Identities = 298/410 (73%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || |||| ||||||| | | | |||||||||| ||| |||||||||| |||||||| Sbjct 172439 TTCACGACCCATAGGCCTTTTACCTCCACGCGGCATTGCTCCATCAGGCTTTCGCCCATT 172498 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 172499 GCAGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 172558 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||||| || ||||||||| |||| || ||| || || ||| || | ||| Sbjct 172559 GGCTGATCATCCTGTCGGACCAGCTACTGATCATCACCTTAGTAAGCTATTGCCTCACCA 172618 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 172619 ACTAGCTAATCAGACGCGAGCCCTTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 172667 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| ||||||||| || | ||||||| |||| Sbjct 172668 TCCTCAGCC--TACGGGGTATTAGCAGTCGTTTCCAGCTATTGTTCCCCTCCTAAGGGCA 172725 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 172726 GGTTCTTATGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 172771 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| ||||||||||||||| || |||||||| |||||| ||||| Sbjct 172772 ---CCGTCTGACTTGCATGTGTTAAGCATGCCGCCAACGTTCATCCTGAG 172818 Score = 226 bits (250), Expect = 7e-57 Identities = 297/410 (72%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | || ||| ||| ||| | |||||||| |||| ||| Sbjct 75691 TTCACGACCCGTAGGCCTTCTACCTCCATGCGACATTGCTCCGTCAGGCTTTCGCCAATT 75750 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||| ||||||||||||| |||| |||||| | || ||||||||| ||||||| Sbjct 75751 GCGGAAAATTCTCCACTGCTGCCTCGCGTAAGAGTCTAGGCCATGTCTCAGTCCCAGTGT 75810 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| ||| |||||| ||| || ||| || | ||| Sbjct 75811 GGCTGATCATCCTCTCGGACCAGCTACTGATTATCGCCTTGGTAAGCTATTGCCTCACCA 75870 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| || | | ||| | | ||| || | || | |||| Sbjct 75871 ACTAGCTAATCAGATGCAAGCCCCTCC--TCG-----GGC----AGATTCCTCCTTTTGC 75919 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | |||| ||||||||| | |||||||| ||| | ||| ||| |||| Sbjct 75920 TCCTCAGCC--TATGGGGTATTAGCAGCTGTTTCCAGCTGTTGTTCCCTTCCCAAGGGCA 75977 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 75978 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 76023 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 76024 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 76070 >seq25567 Length=417175 Score = 226 bits (250), Expect = 7e-57 Identities = 296/410 (72%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || || || ||||||||| | | ||| ||||| ||| | ||| |||| |||||||| Sbjct 363095 TTCACGACTCGTAGGCCTTCTCCCTCTACGTGGCATTGCTCCGTCAAGCTTTCGCCCATT 363036 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||| ||||||||||||||||||||||||| |||||||||||| | ||||| Sbjct 363035 GCGAAAAATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCTAGTGT 362976 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 362975 GGCTGATCATCCTCTCGGACCAGCTATTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 362916 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| || | | | ||| ||| | ||| ||| |||| Sbjct 362915 ACTAGCTAATCAGATGCGAGCCCCTCCTCGGGTG----------AATTCCTCCT-TTTGC 362867 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| ||||||||| ||| | ||||||| |||| Sbjct 362866 TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAACTGTTGTTCCCCTCCCAAGGGCA 362809 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||| |||| ||| || || |||| Sbjct 362808 GGTTCTTACGCGTTACTCACCCGTCCATCACT------GGAAACACCA-----CTTC--- 362763 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || |||| ||| |||||| ||||| Sbjct 362762 ---CCGTCCGACTTGCATGTGTTAAGCATGCCACCAACGTTCATCCTGAG 362716 >seq25246 Length=146716 Score = 223 bits (246), Expect = 8e-56 Identities = 293/403 (73%), Gaps = 30/403 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || |||| ||||||||| | | |||||||||| || |||||||| |||||||| Sbjct 130402 TTCACGACCCTTAGGCCTTCTACCTCCACGCGGCATTACTCTGTCAGGCTTTCGCCCATT 130343 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||| ||||| ||||||| |||||||||||||| ||||| Sbjct 130342 GCGGAAAATTCCCCACTGCTGCCTCTCGTAGAAGTCTGGGCCGTGTCTCAGTTCTAGTGT 130283 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||||||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 130282 GGCTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 130223 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | ||| | || | || ||| ||| ||| Sbjct 130222 ACTAGCTAATCGGACGCTAGCCCCTCC--TCGT------ACGGA--TTCCTCCT-TTTAC 130174 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | ||| ||||||||| ||||||||||| ||| | || ||| ||||| Sbjct 130173 TCCTCAGCC--TATAGGGTATTAGCAACCGTTTCCAGCTGTTGTTCCTTTCCCAAAGGCA 130116 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 ||| | |||||||||||||||||| | ||| || || |||||| Sbjct 130115 AGTTCTTATGTGTTACTCACCCGTCCGCCATT------GGAAACACCA-----CTTCCT- 130068 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCA 407 | |||||||||||||||| || ||||||||||||||| Sbjct 130067 -----ATCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCA 130030 >seq25742 Length=1610859 Score = 196 bits (216), Expect = 1e-47 Identities = 158/191 (83%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||| | ||||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 715777 TTCACGACCTGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 715836 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||||||||||| |||||| ||||||||||| | ||||| Sbjct 715837 GCGAAAAATTCCCCACTGCTGCCTCCCGTAGGCGTCTGGGCCGTGTCTCAGGCCTAGTGT 715896 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||| ||||| |||| |||||| ||| || ||| || | ||| Sbjct 715897 GGCTGATCATCCTCTCGGACTAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 715956 Query 185 ACTAGCTAATC 195 |||| |||||| Sbjct 715957 ACTACCTAATC 715967 >seq24201 Length=9598 Score = 187 bits (206), Expect = 6e-45 Identities = 254/347 (73%), Gaps = 28/347 (8%) Strand=Plus/Minus Query 85 GCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGAC 144 ||||||||||||||||||| |||||||||||| |||||||||| | ||| |||||||| Sbjct 9598 GCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGATCACCCTCTCAGGT 9539 Query 145 CAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCTGGG 204 | |||| | |||||||||| |||| ||| ||||| | ||||||||||||| | | || Sbjct 9538 CGGCTATGTATCGTCGCCTTGGTGAGCCTTTACCTCACCAACTAGCTAATACAACGCAGG 9479 Query 205 TTCATCCGATAGTGAGAG-----GCCC----GAAGGTCC---CCCTCTTTGGTCTTGCGA 252 | |||| |||||| ||| |||| || | | | | || |||| | Sbjct 9478 TCCATCTCATAGTG-GAGCAATTGCCCCTTTTAAATTACTAACATGCGTTAGTCTCTC-- 9422 Query 253 CGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA-GTTTCCC 311 ||||||||||||||| | |||||||| | |||||||||| | || ||| | ||| || Sbjct 9421 --TTATGCGGTATTAGCTATCGTTTCCAATAGTTATCCCCCGCTATGAGGTAGGTTACCT 9364 Query 312 AGACATTACTCACCCGTCCGCCACTCGTCAGCGAA--GCAGCAAGCTGC--TTCCTGTTA 367 | | |||||||||||| ||| |||| | ||| | |||||| | ||| | | Sbjct 9363 ACGCGTTACTCACCCGTTCGCAACTCCT---TGAACCGGTGCAAGCACCAGTTC---TCA 9310 Query 368 CCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||| |||||||||| |||||| ||||||||||||| ||||| Sbjct 9309 GCGTTCTACTTGCATGTATTAGGCACGCCGCCAGCGTTCGTCCTGAG 9263 >seq25391 Length=225660 Score = 170 bits (188), Expect = 5e-40 Identities = 151/189 (80%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | ||||||| || ||| | ||| |||| |||| ||| Sbjct 91337 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGTATTGCTCCGTCAAGCTTTCGCCAATT 91278 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||| |||||||||| |||||||| ||| |||||||||||| | ||||| Sbjct 91277 GCGAAAAATTCCCCATTGCTGCCTCCTGTAGGAGTTTGGGCCGTGTCTCAGTCCTAGTGT 91218 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||| |||| ||| ||||| |||| ||| || ||| || ||| || | | | Sbjct 91217 GGCTGATCATCTTCTCGGACTAGCTACTGATCATCGTCTTGGTAAGCTATTGCCTCACTA 91158 Query 185 ACTAGCTAA 193 ||||||||| Sbjct 91157 ACTAGCTAA 91149 >seq23875 Length=5797 Score = 170 bits (188), Expect = 5e-40 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 4225 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 4284 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 4285 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 4344 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 4345 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 4404 Query 182 CCAACTAGCTAAT 194 ||||||| ||||| Sbjct 4405 CCAACTACCTAAT 4417 >seq25707 Length=1105073 Score = 165 bits (182), Expect = 2e-38 Identities = 287/414 (69%), Gaps = 40/414 (10%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || |||| ||||||||| | | ||| |||||| ||| | |||||||| |||||||| Sbjct 309711 TTCACGACCCATAGGCCTTCTACCTCCACACGGCATTGCTCCGTCAGGCTTTCGCCCATT 309770 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||| | | || |||| ||| ||||||| |||||||||||| | ||||| Sbjct 309771 GCGGAAAATTCCCCATTACCGCATCCCTTAGAAGTCTGGGCCGTGTCTCAGTCCTAGTGT 309830 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACC---CCG 181 ||||| ||||||| |||||| ||||| |||| |||||| ||| || ||| || || Sbjct 309831 GGCTGATCATCCTTTCAGACTAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCATCG 309890 Query 182 CC--AACTAGCTAAT-----CCCATCTGGGTTCATCCGATAGTGAGAGGCCC-------G 227 || | ||||| | ||| || | | ||| || || ||| ||| | Sbjct 309891 CCTTAGTAAGCTATTGCCTCACCAACT-AGCTAATCAGA---TGCGAGCCCCTCCTTGGG 309946 Query 228 AAGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTA 287 || | || | |||| |||| | || | ||||||||| || |||| || || Sbjct 309947 CAGATTCCTCCTTTTGCTCTT--CATCCTACGGGGTATTAGCATCCATTTCTAGCTATTG 310004 Query 288 TCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAG 347 | ||||||| ||||| ||| | |||||||||||||||||||||| ||| Sbjct 310005 TTCCCCTCCTAATGGCAGGTTCTTACGCATTACTCACCCGTCCGCCACT------GGAAA 310058 Query 348 CAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAG 401 || | ||||| |||| |||| |||||||| || || ||||||||| Sbjct 310059 CA-----CCGCTTC------CCGTCCGACCTGCATGTGCTAAGCATGCCGCCAG 310101 >seq25570 Length=424000 Score = 163 bits (180), Expect = 7e-38 Identities = 282/405 (70%), Gaps = 31/405 (8%) Strand=Plus/Plus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| || |||||| | | || || |||| ||| | |||||| |||||||| || Sbjct 402878 ACCCGTAGACCTTCTACCTCCATGCAGCATTGCTCTGTAAGGCTTTCGCCCATTACAAAA 402937 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGA-CCGTGTCTCAGTTCCAGTGTGGCTG 129 |||| ||||||| ||||| ||||||||||| |||||||||||| | |||||||||| Sbjct 402938 AATTCTCCACTGCCACCTCCTCTAGGAGTCTGGGGCCGTGTCTCAGTCCTAGTGTGGCTG 402997 Query 130 GTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAG 189 |||||||||||||| ||||| ||| |||||| ||| || ||| || | |||| | Sbjct 402998 ATCATCCTCTCAGACTAGCTACTGATTATCGCCTTGGTAAGCTATTGCCTCAGCAACCGG 403057 Query 190 CTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTG 249 |||||| | | | | ||| | ||| | || ||| ||| |||| ||| Sbjct 403058 CTAATCAGACGCGAGCCCCTCCTA-------AGG-CGGA--TTCCTCCT-TTTG--CTTC 403104 Query 250 CGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTC 309 | || | ||||||||| ||||||||||| ||| | | ||||| ||||| ||| Sbjct 403105 TCAGCCTACGGGGTATTAGCAACCGTTTCCAGCTGTTGTTCTCCTCCCAAGGGCAGGTTC 403164 Query 310 CCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACC 369 | ||||||||| |||||||||| ||| || || |||| || Sbjct 403165 TTACGTGTTACTCACCTGTCCGCCACT------GGAAACACCA-----CTTC------CC 403207 Query 370 GTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || |||||||||||||||| || |||||| || ||| | ||||| Sbjct 403208 GTCCGACTTGCATGTGTTAAGCATGCCGCTAGTGTTTATCCTGAG 403252 >seq25487 Length=306728 Score = 154 bits (170), Expect = 4e-35 Identities = 149/190 (78%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || | ||| ||| ||||| | | |||| ||||| ||| |||||||||| | |||||| Sbjct 230079 TTCACGAACCGTAGGGCTTCTACCTCCACGTGGCATTGCTCCATCAGGCTTTCACCCATT 230020 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||| |||||||||| | ||||||| ||| ||| ||| | | | ||||| Sbjct 230019 GCGGAAAATTCCCTGCTGCTGCCTCTCATAGGAGTGTGGGCCGC-TCTAACTCCTAGTGT 229961 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||||||||| ||| |||| |||||| ||| || ||| | | ||| Sbjct 229960 GGCTGATCATCCTCTCAGACCAACTACTGATCATCGCCTTGGTAAGCTATTGCTTCACCA 229901 Query 185 ACTAGCTAAT 194 |||||||||| Sbjct 229900 ACTAGCTAAT 229891 >seq25656 Length=683670 Score = 127 bits (140), Expect = 5e-27 Identities = 143/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 22 TTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACT 81 ||||||| ||| ||| || ||| || ||||| ||||||||| ||| |||||||| | Sbjct 50485 TTCTTCACTCACACGGTATTGCTAGATTGGGCTTTTGCCCATTGTCCAAGATTCCCCATT 50426 Query 82 GCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCA 141 | | || ||||||||||||||| ||||||| || |||| |||||||| |||||| | Sbjct 50425 GGTCCC-CCCGTAGGAGTCTGGGTCGTGTCTTAG-TCCATTGTGGCTGATCATCCGAAAA 50368 Query 142 GACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCT 201 ||||||||| | ||| | | || || ||| ||||| ||||||| ||||| | || | Sbjct 50367 GACCAGCTACGCATCATTGGCTTAGTCAGCCTTTACCTGACCAACTACCTAATACTATGT 50308 Query 202 GGGTTCATC 210 || ||||| Sbjct 50307 AGGCTCATC 50299 >seq24926 Length=59119 Score = 123 bits (136), Expect = 6e-26 Identities = 89/103 (86%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 93 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGG 152 |||||||||||||||||||||||| ||| |||||||| |||| ||||| ||||||||| Sbjct 16700 TAGGAGTCTGGACCGTGTCTCAGTCCCAATGTGGCTGATCATGCTCTCGGACCAGCTACT 16641 Query 153 GATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 |||| |||||| |||| || ||| || | |||||||||||||| Sbjct 16640 GATCATCGCCTTGGTGAGCTATTGCCTCACCAACTAGCTAATC 16598 >seq25386 Length=224155 Score = 98.7 bits (108), Expect = 2e-18 Identities = 128/176 (73%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 20 CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCA 79 |||||| | | ||| ||||| ||| | | |||||| | |||| || || |||| | | Sbjct 163563 CCTTCTACCTGCACAAGGCATTGCTTCGTTAGGCTTTATCTCATTATGGAAAATTCTC-A 163621 Query 80 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCT 139 || ||||||| |||||||| | || ||||||||||| | | ||||| ||||||||| Sbjct 163622 TTGTTGCCTCCTATAGGAGTCCGAGCCTTGTCTCAGTTCTAATATGGCTAATCATCCTCT 163681 Query 140 CAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 | ||||||||| |||| | | || | | | ||| || | |||||||||||| Sbjct 163682 CGGACCAGCTATTGATCATTGTCTTGATAAACTATTGCCTCAATAACTAGCTAATC 163737 >seq25754 Length=2373262 Score = 84.2 bits (92), Expect = 5e-14 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 69 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCT 128 || |||| ||| || ||||||| || |||| ||| ||| |||||| | ||||||| | Sbjct 531155 AAAATTCTCCATTGTCGCCTCCCATATGAGTTTGGGATGTGCCTCAGTCCTAGTGTGGTT 531214 Query 129 GGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTA 188 ||||||| ||||||||||||| |||| || || || || ||| || | | ||||| Sbjct 531215 AATCATCCTTTCAGACCAGCTAGTGATCATCATCTTGGCAAGCTATTGCCTCACTAACTA 531274 Query 189 GCTAAT 194 ||||| Sbjct 531275 ACTAAT 531280 >seq25552 Length=380847 Score = 77.0 bits (84), Expect = 8e-12 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 85 GCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGAC 144 ||||||| ||||||||| | || ||||| ||| |||||||||||| |||||||||| ||| Sbjct 214516 GCCTCCCATAGGAGTCTAGGCCATGTCTTAGTCCCAGTGTGGCTGATCATCCTCTCGGAC 214457 Query 145 CA 146 || Sbjct 214456 CA 214455 >seq25639 Length=618592 Score = 75.2 bits (82), Expect = 3e-11 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 107 GTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGG 166 || ||||||| || |||||||| ||||||||| | ||||||| |||| |||| | || Sbjct 189675 GTATCTCAGTCCCGATGTGGCTGATCATCCTCTTGGGCCAGCTACTGATCATCGCTTTGG 189734 Query 167 TGGGCCATTACCCCGCCAACTAGCTAATC 195 | || ||| || | |||||||||||||| Sbjct 189735 TAAGCTATTGCCTCACCAACTAGCTAATC 189763 >seq24854 Length=47841 Score = 73.4 bits (80), Expect = 1e-10 Identities = 75/98 (77%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 53 CTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 112 ||| | |||||| | || |||| ||| ||| ||||| | ||||||||||| || ||||| Sbjct 31743 CTTTCACCCATTATTGAAAATTCTCCATTGCCGCCTCTCATAGGAGTCTGGGCCATGTCT 31684 Query 113 CAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 |||| | ||| ||| | | ||||| || | ||||||| Sbjct 31683 CAGTCCTAGTATGGTTAATTATCCTTTCGGGCCAGCTA 31646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222085073088