Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ricinus_20communis_20[refseq_20GCF_5F000151685.1_202011-07-07] 25,763 sequences; 350,621,860 total letters Query= NC_031941.1 Length=34563 Score E Sequences producing significant alignments: (Bits) Value seq13672 120 7e-23 >seq13672 Length=1125 Score = 120 bits (132), Expect = 7e-23 Identities = 180/253 (71%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 31931 CTATAGTTACGACTACTACGACCATCCAGCTTCTGCAGGTACAGGGCAGTATTTGAACGA 31990 ||| | |||| | ||||||||||| ||||||| || |||||||| |||||| | || || Sbjct 384 CTACACTTACAATTACTACGACCACGCAGCTTCAGCTGGTACAGGTCAGTATCTAAATGA 443 Query 31991 TGTACGAGTGGAGCGAATTGAGTTGCCAGTAGATATCGATGCCGACTTCGTCATTCCAAT 32050 ||||| ||| || |||||| || ||||| ||| ||| || || || ||||| || | Sbjct 444 TGTACAAGTAGAAACAATTGAATTACCAGTCGATTACGACGCTGATTTTGTCATACCGGT 503 Query 32051 CAAAGGTGACTCCATGGAGCCTGACTATCACGACGGCGACCTGGTATTCATTCAGACCAG 32110 | || || || ||||| || || || || || ||| ||||| | ||| || | Sbjct 504 TTATGGCGATTCTATGGAACCCGAATACCATTCTGGGGACTATGTATTTA-TCAAACTAT 562 Query 32111 C-GTGGACTTGAATGACGGAGTTATCGGAGTGTTCAACTATAACGGCGATGCTTATATCA 32169 | | || || || || | ||| ||||| || | ||| |||| ||||||||||||| Sbjct 563 CTATTAACCTGTCAGATGGTGATATAGGAGTTTTTGAGTATTACGGTGATGCTTATATCA 622 Query 32170 AGCAGCTTGTCAT 32182 | || ||||| || Sbjct 623 AACAACTTGTTAT 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110446200232150