Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13]
307,872 sequences; 711,719,955 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1861 201 3e-49
seq750 176 1e-41
seq2006 161 2e-37
seq4310 138 3e-30
seq137 118 3e-24
seq10209 114 3e-23
seq3033 105 2e-20
seq7720 89.7 1e-15
seq4032 80.6 7e-13
seq272 75.2 3e-11
>seq1861
Length=62895
Score = 201 bits (222), Expect = 3e-49
Identities = 306/418 (73%), Gaps = 22/418 (5%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| | ||| | || |||||| ||| ||||| | |||||| ||||| |
Sbjct 28462 CCACAACTCAT-CTGCTGA-TTCTTCAACATCAGTAGGTTCAGACCTCCACTTAGTT-TC 28518
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 28519 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 28574
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | |||||| |||||||||||| ||||| | |||| | ||| |||| |
Sbjct 28575 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGGTTCCCTTAACCAA 28632
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA---CCCAACAA 243
||||||| || |||| ||| | |||| | ||| ||| |||| |||| |||||
Sbjct 28633 -GCCACTGCCTATGAGTCACTGGCTCATTCTTCAATAGGCACGCGGTCAGAGCCCAA--- 28688
Query 244 AGTGGGC-TCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302
|| | |||||||||||| || |||||||||| | ||||||||||||||| | |
Sbjct 28689 --TGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-G 28745
Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362
|||||||||| || |||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct 28746 AGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTA 28805
Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||| | | |||||| | ||||| || || | |||| || | |||||||
Sbjct 28806 GCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGTCCCATGCTACTCG 28863
>seq750
Length=101112
Score = 176 bits (194), Expect = 1e-41
Identities = 301/418 (72%), Gaps = 23/418 (6%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| | ||| | || |||||| ||||||||||| |||||| ||||| |
Sbjct 67328 CCACAACTCAT-CTGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 67272
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||| ||| || |||| ||| ||||||||| || | || ||||||||| | ||
Sbjct 67271 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCTAGGTT-CGGGTCTATAAGC-AGT 67216
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | |||||| |||||||||||| ||||| | ||| | ||| |||| |
Sbjct 67215 GACAATT-GCCCTATGAAGACTCGCTTT-CGCTATGGCTCTGGTGGGTTCCCTTAACCAA 67158
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA---CCCAACAA 243
|||||| || |||| | ||| |||| | ||| ||| |||| || | |||||
Sbjct 67157 -GCCACTACCTATGAGTCACCGACTCATTCTTCAACAGGCACGCGGTTAGAGCCCAA--- 67102
Query 244 AGTGGGC-TCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302
|| | ||||||| |||| || || ||||||| | ||||||||||||||| | |
Sbjct 67101 --TGCTCATCCCACTACTTGGGAGCTTAAGGTTTCATGTTCTATTTCACTCCCCGATG-G 67045
Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362
|||||| || | || ||||||||||||| || |||||||||||||| ||| ||||||||
Sbjct 67044 GGGTTCATT-CACCCTTCCCTCACGGTAGTACTTCACTATCGGTCACCCAGGAGTATTTA 66986
Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||| | | |||||| | ||||| || | || | | || || | |||||||
Sbjct 66985 GCCTTGCAAGGTGGTCCTTGCTGATTCACACGAGATTCCACATGTCCCATGCTACTCG 66928
>seq2006
Length=59971
Score = 161 bits (178), Expect = 2e-37
Identities = 271/374 (72%), Gaps = 16/374 (4%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| | ||| | || |||||| |||||||| | | |||| ||||| |
Sbjct 44300 CCACAACTCAT-CTGCTGA-TTCTTCAACATCAGTCGGTTTTGACGTCCACTTAGTT-TC 44244
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||| ||| || |||| ||| ||||||||| ||| | || ||||||| | | ||
Sbjct 44243 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCTGTAAGC-AGT 44188
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | ||||| |||||||||||| || || | |||| | ||| |||| |
Sbjct 44187 GACGATTT-CCCTATGAAGACTCGCTTT-CGTTATGGCTCCGGTGGGTTCCCTTAACCAA 44130
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246
|||||| || |||| | | | |||| | || ||| |||| ||||| ||| |
Sbjct 44129 -GCCACTCCCTATGAGTCACCGGCTCATTCTTCAGCAGGCACGCGGTCACAGCCCAA--T 44073
Query 247 GGGCT-CCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305
| || ||||||||||| || ||| |||||| | ||||||||||||||| | ||||
Sbjct 44072 GCTCTTCCCACTGCTTGGGAGCTTACAGTTTCATGTTCTATTTCACTCCCCAATA-GGGG 44014
Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365
|| ||||| || |||||||||||||||| ||||||||| |||| ||| |||||||||||
Sbjct 44013 TTTTTTTCACCCTTCCCTCACGGTACTACTTCACTATCTGTCACCCAGGAGTATTTAGCC 43954
Query 366 TTGGAGGATGGTCC 379
|| | | ||||||
Sbjct 43953 TTACAAGGTGGTCC 43940
>seq4310
Length=34640
Score = 138 bits (152), Expect = 3e-30
Identities = 134/171 (78%), Gaps = 1/171 (1%)
Strand=Plus/Minus
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
||||||||||||| || |||||||||| | ||||||||||||| | | ||||||||
Sbjct 20702 CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCTCGATG-GGGGTTCT 20644
Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369
|||| || ||||||||| |||||| |||||||| ||||| |||| ||||||||||||||
Sbjct 20643 TTTCACCCTTCCCTCACAGTACTACTTCACTATTGGTCATTCAGGAGTATTTAGCCTTGC 20584
Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
| | |||||| | ||||| ||| || | |||| || | || ||||
Sbjct 20583 AAGGTGGTCCTTGCTGATTCACACAGGATTCCACGTGTCCCATGCTCCTCG 20533
>seq137
Length=177946
Score = 118 bits (130), Expect = 3e-24
Identities = 240/341 (70%), Gaps = 24/341 (7%)
Strand=Plus/Plus
Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88
|| |||||| ||||||||| | |||||| ||||| | || ||| || || |
Sbjct 63516 TTCTTCAACATCAGTCGGTTCAGACCTCCACTTAGTT-TCACTTGTGCTT-CATCCCGGT 63573
Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGA 148
||| ||||||||| || | || |||||| || | || ||| | |||||| ||||
Sbjct 63574 CAT-GGATAGATCATCCAGGTT-CGGGTCCATAAGC-AGTGACAATT-GCCCTATGAAGA 63629
Query 149 CTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206
|||||||| |||| || |||| | ||| |||| | ||||||| ||||||| |
Sbjct 63630 CTCGCTTT-CGCTGCGGCTCCGGTGGGTTCCTTTAACCAA-GCCACTGCCTATAAGTCCC 63687
Query 207 TGACCCATTATACAAAAGGTACGCAGTCA---CCCAACAAAGTGGGCTCCCACTGCTTGT 263
| | |||| | ||| ||| ||||||| | || ||| |||||||||||||
Sbjct 63688 -GTCTCATTCTTCAACAGGCACGCAGTTAGAGCCGAACGCTC----CTCCCACTGCTTGG 63742
Query 264 ACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCT 323
|| ||| |||||| | ||||||||||| |||| ||||||||||| || ||||||
Sbjct 63743 GAGCTTACAGTTTCATGTTCTATTTCACT-CCCTAATGTGGGTTCTTTTCACCCTTCCCT 63801
Query 324 CACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||| ||||||| ||||| || ||||||||||
Sbjct 63802 CACGGTA-----TCACTATAGGTCACCCATGAGTATTTAGC 63837
>seq10209
Length=15052
Score = 114 bits (126), Expect = 3e-23
Identities = 104/130 (80%), Gaps = 1/130 (1%)
Strand=Plus/Plus
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
||||||||||||| || || ||||||| | || |||||||||||| | ||||||||
Sbjct 11894 CTCCCACTGCTTGGGAGCTTATGGTTTCATGTTCAATTTCACTCCCCGATG-GGGGTTCT 11952
Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369
|||| || ||| ||||| |||||| ||||||||||| || ||| |||||||| ||||
Sbjct 11953 TTTCACCCTTCACTCACAGTACTACTTCACTATCGGCCACCCAGGAGTATTTAATCTTGC 12012
Query 370 AGGATGGTCC 379
| | ||||||
Sbjct 12013 AAGGTGGTCC 12022
>seq3033
Length=45737
Score = 105 bits (116), Expect = 2e-20
Identities = 207/291 (71%), Gaps = 20/291 (7%)
Strand=Plus/Minus
Query 44 CGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGC 103
|||||||| |||||| || || | |||||| ||| || |||| ||| ||||||||| |
Sbjct 24694 CGGTTCGGACCTCCACTTTGTT-TCACCCAAGCTT-CATCCTGGTCAT-GGATAGATCAC 24638
Query 104 CCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTAC 163
|| || | |||| || | | ||| | |||||| |||||||||||| | |||
Sbjct 24637 CCAAGTT-CAGGTCCATAAGCAAT-GACAATT-GCCCTATGAAGACTCGCTTT-CATTAC 24582
Query 164 GCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAA 221
|||| | ||| |||| | ||||||| || |||||| | | |||| | |||
Sbjct 24581 AGCTCCGGTGGGTTCCCTTAACCAA-GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAA 24523
Query 222 AAGGTACGCAGTCA---CCCAACAAAGTGGGC-TCCCACTGCTTGTACGCATACGGTTTC 277
||| |||| |||| ||||| || | |||||||||||| || |||||||||
Sbjct 24522 CAGGCACGCGGTCAGAGCCCAA-----TGCTCCTCCCACTGCTTGCGAGCTTACGGTTTC 24468
Query 278 AGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328
| | |||||| ||||||| | |||||||||||| || |||||||||||
Sbjct 24467 ATGTTCTATTGTACTCCCCGAT-GGGGGTTCTTTTCACCCTTCCCTCACGG 24418
>seq7720
Length=20388
Score = 89.7 bits (98), Expect = 1e-15
Identities = 68/78 (87%), Gaps = 2/78 (3%)
Strand=Plus/Plus
Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329
||||||||| | ||||||||||||||| | |||||| ||||| || ||||||||||||
Sbjct 12784 ACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGTT-TTTTCACCCTTCCCTCACGGT 12841
Query 330 ACTAGTTCACTATCGGTC 347
|||| |||||||||||||
Sbjct 12842 ACTACTTCACTATCGGTC 12859
>seq4032
Length=36571
Score = 80.6 bits (88), Expect = 7e-13
Identities = 114/150 (76%), Gaps = 8/150 (5%)
Strand=Plus/Minus
Query 20 TCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTT 79
|||||| | || |||||| ||||||||||| |||||| ||||| | |||||| | ||
Sbjct 23193 TCCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTCACCCAAGC-TT 23137
Query 80 CAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCC 139
|| |||| | | ||||||||| ||| | |||||||| | | ||| ||| | |||
Sbjct 23136 CATCCTGGTCGT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGTGAC-AATTGCC 23081
Query 140 CTAGTAAGACTCGCTTTTCGCTACGCCTCC 169
||| ||||||||| |||||||||| ||||
Sbjct 23080 CTATGAAGACTCGC-TTTCGCTACGGCTCC 23052
>seq272
Length=148728
Score = 75.2 bits (82), Expect = 3e-11
Identities = 191/276 (69%), Gaps = 20/276 (7%)
Strand=Plus/Minus
Query 20 TCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTT 79
|||||| | || |||||| | |||||| || |||||| ||||| | |||||| |||
Sbjct 11294 TCCGCTGA-TTCTTCAACATCAATCGGTTAGGACCTCCACTTAGTT-TCACCCAAGCTT- 11238
Query 80 CAACCTG----CC----CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGAC 131
|| |||| || ||| |||| |||| ||| | || |||||| ||| | || |||
Sbjct 11237 CATCCTGGTCTCCTGGTCAT-GGATGGATCACCCAGGTT-CGGGTCCATTGGC-AGTGAC 11181
Query 132 TAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGC 189
| | |||| ||||||||||||| |||| |||| || ||| |||| | ||
Sbjct 11180 AATT-GTCCTATGAAGACTCGCTTTT-GCTATTGCTCCGGTAGGTTCCCTTAACCAA-GC 11124
Query 190 CACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGG 249
||||| || |||||| | | ||| | ||| ||| |||| |||| ||| |
Sbjct 11123 CACTGCCTATGAGTCGCCGGCTTATTCTTCAACAGGCACGCGGTCAGAGCGCAATGCTC- 11065
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTA 285
||||||||||||| || |||||||||| | ||||
Sbjct 11064 CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTA 11029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1237777461248
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