Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosa_20x_20damascena_20[genbank_20GCA_5F001662545.1_202016-06-13]
307,872 sequences; 711,719,955 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq81025 118 1e-24
seq839 105 7e-21
>seq81025
Length=688
Score = 118 bits (130), Expect = 1e-24
Identities = 137/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 440 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 381
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| || || ||| || | ||| | |||||||
Sbjct 380 GGGATAACATCATAGGATTT-CGGTCCTGTTCTGTTGGCCTTCGGGATCAGA-GTAATGA 323
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||||||||||||| | |||| || |||| |||| |||||||||||||||
Sbjct 322 TTAACAGGGATAGTCGGGGGCATTCATATTTCATAGTCAGAGGTAAAATTCTTGGATTTA 263
Query 190 T 190
|
Sbjct 262 T 262
>seq839
Length=95879
Score = 105 bits (116), Expect = 7e-21
Identities = 135/181 (75%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 10239 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 10180
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | |||| ||| ||| | | ||| || |||||||
Sbjct 10179 GGGATAACATCATAGGATTT-CGGTCTTATACTGTTGCCCTTCGGGATCGGA-GTAATGA 10122
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| | |||| || |||||||||||||||||
Sbjct 10121 TTAACAGGGACAGTCGGGGGCATTCGTATTTCACAGTCAGAG-TGAAATTCTTGGATTTA 10063
Query 190 T 190
|
Sbjct 10062 T 10062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510472954880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |