Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq428777 187 6e-45 seq456161 176 1e-41 seq609128 113 1e-22 seq718370 78.8 2e-12 >seq428777 Length=1304 Score = 187 bits (206), Expect = 6e-45 Identities = 285/404 (71%), Gaps = 8/404 (2%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| | ||||||| ||||||||||||||| ||| || ||| |||| ||| || Sbjct 1249 GAATAAGCATCAGCTAACTCTGTGCCAGCAGCCGCGATAAGACAAAGGATGCATGCGCTA 1190 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||||||||||||| | ||| || | | |||| | | || ||||||| Sbjct 1189 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCC 1130 Query 131 CGGGCTTAACCTGGGA---ATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGG 187 |||| |||| ||| || | | | | | | || |||| | || || | Sbjct 1129 ATGGCTCAACCCTGGACAGATGG---TGGAAAATACCAAGCTGGAGTACGGTAGGGGCAG 1073 Query 188 GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAG 247 |||||| | ||| ||| |||||||||||||| || | | ||||||||| ||| || Sbjct 1072 AGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCAAAA 1013 Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307 ||| | ||||| |||||||| || | |||||||| ||||||| || |||||| Sbjct 1012 GCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTA 953 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTT 367 ||||||| ||||||| ||| |||||||| ||||| | || | | | || | Sbjct 952 GATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGT 893 Query 368 G--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || ||||||||||||| |||| ||||||||||| ||| Sbjct 892 GCAGTGTTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 849 >seq456161 Length=1433 Score = 176 bits (194), Expect = 1e-41 Identities = 235/327 (72%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| | ||||||| ||||||| ||||||||||| || ||| |||||||| || Sbjct 337 GAATAAGCATCAGCTAACTCTGTGCCAGTAGCCGCGGTAAGACAGAGGATGCAAGCGATA 278 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 ||||| | |||||||||||||| | || || | | |||| | | || ||||||| Sbjct 277 TCTGGAATGATTGGGCGTAAAGCGTCTGTAGTTGGCTTTTTAAGTCCGCCGTCAAATCCC 218 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| ||||| ||| ||| | | || | || |||| | || | | | Sbjct 217 AGGGCTCAACCTTGGACAGGCAGTGGAAGCTACCAAGCTGGAGTACGGTAGGGACAGAGG 158 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| | ||| || |||||||| ||||| || | | ||||||||| |||||| ||| Sbjct 157 GAATTTCCGGTGGAGTGGTGAAATGTGTAGAGATCAGAAAGAACACCAACGGCGAAAGCA 98 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | ||| | |||||||| || | |||||||| ||||||| || ||||||||| Sbjct 97 CTCTGCTGCGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGAT 38 Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337 |||| ||||||| ||| |||||||| Sbjct 37 ACCCCAGTAGTCCTAGCCGTAAACGAT 11 >seq609128 Length=9556 Score = 113 bits (124), Expect = 1e-22 Identities = 222/327 (68%), Gaps = 1/327 (0%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| || |||||| ||||||||||| || |||| || ||| ||||||||||| Sbjct 7283 GAATAAGCATCGACTAACTCTGTGCCAGCAGCTGCAGTAAGACAGAGGATGCAAGCGTTA 7224 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 | |||| | |||| || |||||| | ||| | | | |||| | | || ||||||| Sbjct 7223 TCCAGAATGATTGGGTGTCAAGCGTCTGTAGGTGACTTTTTAAGTCCGCCGTCAAATCCC 7164 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 || | |||| ||| || | | | | | || |||| || || | | | Sbjct 7163 AAGGTTCAACCCTGGATAGACAGTGGAAATTACCAAGCTGGAGTATGGTAGGGACAGAGG 7104 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 || || ||| || |||||||||||||| || | ||||||||| ||||| ||| Sbjct 7103 GATTTTTCGGTGGAGAGGTGAAATGCGTAGAGATTGAAAAGAACACCAACAGCGAAAGCA 7044 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | || || ||||| || || | |||||||| ||||||| || ||||||| | Sbjct 7043 CTCTACTAGGCCGACACTAACACTAAGAGACGAAAGCCAGGGGAGCGAATGGGATTAG-T 6985 Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337 |||| ||||| | | | |||| ||| Sbjct 6984 ACCCCAGTAGTTCTAGTCGTAAATGAT 6958 >seq718370 Length=927 Score = 78.8 bits (86), Expect = 2e-12 Identities = 105/145 (72%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| |||||||||||||| || | | |||||||||| || || || Sbjct 362 GGAATTTCTGGTGGAGCGGTGAAATGCGTAGAGATTAGAAAGAACACCAATAGCAAAAGC 303 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | || || ||||| || || | | |||||| |||||| ||| |||||||| Sbjct 302 ACTCTGCTAGG-CGACACTAACACTGAGAGATGAAAGCTAGGGGAGAAAATGGGATTAGA 244 Query 310 TACCCTGGTAGTCCACGCCCTAAAC 334 ||||| ||||| ||| ||||| Sbjct 243 TACCCCAATAGTCGTAGCCGTAAAC 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1279356861952