Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20]
794,288 sequences; 740,035,655 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq606544 87.8 2e-15
seq552020 87.8 2e-15
seq537721 82.4 8e-14
seq685440 78.8 1e-12
seq772317 73.4 4e-11
>seq606544
Length=821
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 733 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 676
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| | ||| |||||||| |||||||||||| ||
Sbjct 675 GGGGTCGCAGTGACCAGGCCTGGGCGACTGTTTACCAAAAACACAGGTCT 626
>seq552020
Length=8072
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| ||
Sbjct 3208 TAAGGAACTTGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGG 3149
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
|| ||||| || ||| || ||| ||| |||| |||||||||||| ||
Sbjct 3148 GA--TCGCAGTGACCAGGCCCGGGCGACTATTTACCAAAAACACAGGTCT 3101
>seq537721
Length=570
Score = 82.4 bits (90), Expect = 8e-14
Identities = 89/117 (76%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| | |||| | ||| |||||||||||| || |||| | | | || ||| |
Sbjct 280 TAAGGAACTCGACAAAATAGCCCAGTAACTTCGGGAGAAGGGGTGCGTCCTCACAAA--G 337
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
| || ||||| || | | || ||| |||||||| |||||||||||| || ||| ||
Sbjct 338 GGGGTCGCAGTGACCATGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAAA 394
>seq685440
Length=1708
Score = 78.8 bits (86), Expect = 1e-12
Identities = 88/117 (75%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| | |||| | ||| |||||||||||| || |||| | | | || ||| |
Sbjct 1583 TAAGGAACTCGACAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCATCCTCACAAA--G 1526
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
| || ||||| || | | | ||| |||||||| |||||||||||| || ||| ||
Sbjct 1525 GGGGACGCAGTGACCATGCCTGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAAA 1469
>seq772317
Length=4642
Score = 73.4 bits (80), Expect = 4e-11
Identities = 76/100 (76%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| |||||| || | || || ||| ||| || ||||||| ||| || | |||
Sbjct 344 CAAACCGACACAAGTGAACAAGTAGAGTATTCTAGGGTGCTTGAGAGAACCATGTCAAAG 285
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123
||||| |||||| ||||| |||||||||||| || ||||
Sbjct 284 GAACTCGGCAAAATGACCTCGTAACTTCGGGAGAAGGGGT 245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 527112593952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |