Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20]
794,288 sequences; 740,035,655 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq456161 201 2e-49
seq559850 181 2e-43
seq533196 179 8e-43
seq765720 167 5e-39
seq57984 165 2e-38
seq609128 161 2e-37
seq692555 150 4e-34
seq400464 141 2e-31
seq324309 138 2e-30
seq106765 136 8e-30
seq766578 120 6e-25
seq737182 114 3e-23
seq239742 114 3e-23
seq74662 102 2e-19
seq428776 86.0 1e-14
seq97894 86.0 1e-14
seq581694 84.2 5e-14
seq360260 84.2 5e-14
seq50221 80.6 6e-13
seq509365 75.2 2e-11
>seq456161
Length=1433
Score = 201 bits (222), Expect = 2e-49
Identities = 145/166 (87%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||| ||||||| || ||||||||||||||||||
Sbjct 402 CACGCGGCATTG-CTCCGTCAGGCTTTCACCCATTGCGGAAAATTCCCCACTGCTGCCTC 460
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| ||||||| ||| |||||||| |||||||||||||| |||||| |
Sbjct 461 CCGTAGGAGTCTGGGTCGTGTCTTAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 520
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194
|| |||| |||||||||| ||| ||| |||||||||||||||||||
Sbjct 521 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 566
>seq559850
Length=11969
Score = 181 bits (200), Expect = 2e-43
Identities = 117/128 (91%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGAT 130
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||
Sbjct 4902 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGAT 4961
Query 131 CATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCT 190
||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||||
Sbjct 4962 CATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCT 5021
Query 191 AATCCGAC 198
|||| |||
Sbjct 5022 AATCAGAC 5029
>seq533196
Length=6825
Score = 179 bits (198), Expect = 8e-43
Identities = 116/127 (91%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 72 TTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATC 131
||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct 2471 TTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATC 2412
Query 132 ATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTA 191
|||||||| |||||| ||| |||| |||||||||| ||| ||| ||||||||||||||||
Sbjct 2411 ATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTA 2352
Query 192 ATCCGAC 198
||| |||
Sbjct 2351 ATCAGAC 2345
>seq765720
Length=1578
Score = 167 bits (184), Expect = 5e-39
Identities = 128/152 (84%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106
||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||
Sbjct 347 TCAGGCTTTCGCCCATTAAGGAAAATTCCCCACTGCTGCCTCCTATAGGAGTCTGGGCCA 406
Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166
||||||||| | || || ||||||||||||| |||||| ||| |||| ||||||||||
Sbjct 407 TGTCTCAGTCCTGGTATGGTTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGT 466
Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGAC 198
||| ||| |||||||||||||||||| |||
Sbjct 467 AAGCTATTGTCTCACCAACTAGCTAATCAGAC 498
>seq57984
Length=346
Score = 165 bits (182), Expect = 2e-38
Identities = 137/166 (83%), Gaps = 1/166 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||| |||||||| || |||||||||||| |||||| | || ||||||| |||||||||
Sbjct 203 CACACGGCATTG-CTTCATCAGGCTTTCGTCCATTGCCGAAAATTCCCCGTTGCTGCCTC 145
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
||||||| ||||| || ||| ||| | ||| | | |||||||||||||||| ||||| |
Sbjct 144 TCGTAGGACTCTGGGCCATGTTTCAATCCCAATATAACTGATCATCCTCTCAAACCAGCT 85
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194
|| |||| ||||||| || || ||| |||||||||||||||||||
Sbjct 84 ACTGATCATCGCCTTAGTAAGTTATTGCCTCACCAACTAGCTAATC 39
>seq609128
Length=9556
Score = 161 bits (178), Expect = 2e-37
Identities = 140/171 (82%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||| |||| |||||||| || |||||||| |||||||||
Sbjct 7348 CACGCGGCATTG-CTCCGTCAGACTTTTGCCCATTGAGGAAAATTCCCCATTGCTGCCTC 7406
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACC-AGT 147
| |||||||| ||| ||||||||||| | | |||| |||||||||||||| ||| | |
Sbjct 7407 CTGTAGGAGTTTGGGTCGTGTCTCAGTCCTACTGTGGCTGATCATCCTCTCGTACCAACT 7466
Query 148 TACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
||| |||| |||||||||| || ||| |||||| |||||||||||| |||
Sbjct 7467 TACTGATCATCGCCTTGGTATGCTATTGCCTCACAAACTAGCTAATCAGAC 7517
>seq692555
Length=413
Score = 150 bits (166), Expect = 4e-34
Identities = 105/118 (89%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|| ||||||||| || ||||||||||||||||||| || ||||||||||||||||||
Sbjct 166 CATGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTAGAAAATTCCCCACTGCTGCCTC 224
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG 146
|||||||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||
Sbjct 225 CCGTAGGAGTCTGGGCCGTGCCTCAGTTCCAATGTGGCTGATCATCCTCTCGGACCAG 282
>seq400464
Length=1501
Score = 141 bits (156), Expect = 2e-31
Identities = 131/165 (79%), Gaps = 1/165 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||||| || ||| || |||| |||||||||||| || |||||||| |||||||||
Sbjct 531 CACGCAGCTTTG-CTCCGTCAGATTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTC 473
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
| ||||||||||| | ||||||| | |||||||| |||||||||| ||| | ||| |
Sbjct 472 CTGTAGGAGTCTGCGACTTGTCTCAATCCCAGTGTGGCTGATCATCCGCTCGAATCAGCT 413
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193
|| ||| || ||||||| | | ||| ||||||||||||||||||
Sbjct 412 ACTAATCCTCACCTTGGTAATCTATTGCCTCACCAACTAGCTAAT 368
>seq324309
Length=907
Score = 138 bits (152), Expect = 2e-30
Identities = 102/118 (86%), Gaps = 1/118 (1%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|| ||||||||| || |||||||||| |||||||| || ||||||||||||| ||||
Sbjct 808 CATGCGGCATTG-CTCCGTCAGGCTTTCACCCATTGTAGAAAATTCCCCACTGCTACCTC 750
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG 146
|||||||||||||| |||| |||||||||| |||| |||||||||||||| ||||||
Sbjct 749 CCGTAGGAGTCTGGGTCGTGCCTCAGTTCCAATGTGGCTGATCATCCTCTCGGACCAG 692
>seq106765
Length=629
Score = 136 bits (150), Expect = 8e-30
Identities = 124/155 (80%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 50 GGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGT 109
|||||||| |||||| || ||| ||||||||||||||| |||||| ||||| ||||
Sbjct 289 GGCTTTCGTCCATTGCAGAAAATTTCCCACTGCTGCCTCCAGTAGGAATCTGGGTTGTGT 348
Query 110 CTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG 169
|||||| || |||| ||||||||| |||| ||||| ||| ||| | |||||||| ||
Sbjct 349 CTCAGT-CCTGTGTAGCTGATCATCTTCTCGAACCAGCTACTAATCATTGCCTTGGTAAG 407
Query 170 CCATTACCTCACCAACTAGCTAATCCGACCTAGGC 204
| ||| ||||||||||||||||| ||| || ||
Sbjct 408 CTATTGTATCACCAACTAGCTAATCAGACGTAAGC 442
>seq766578
Length=9890
Score = 120 bits (132), Expect = 6e-25
Identities = 83/94 (88%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164
||||||||||| |||||||| || ||||||||||| |||||| ||| |||| ||||||||
Sbjct 2896 CGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACCAGCTACTGATCATCGCCTTG 2955
Query 165 GTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| ||| ||| ||||||||||||||||||| |||
Sbjct 2956 GTAAGCGATTGCCTCACCAACTAGCTAATCAGAC 2989
>seq737182
Length=910
Score = 114 bits (126), Expect = 3e-23
Identities = 75/83 (90%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 42 CTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 101
|||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||
Sbjct 560 CTGGATCAGGCTTTCGCCCATTGTCCAAGATTTCCCACTGCTGCCCCCCACGGGAGTCTG 619
Query 102 GACCGTGTCTCAGTTCCAGTGTG 124
| |||||||||||| ||||||||
Sbjct 620 GGCCGTGTCTCAGTCCCAGTGTG 642
>seq239742
Length=404
Score = 114 bits (126), Expect = 3e-23
Identities = 75/83 (90%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 42 CTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 101
|||||||||||||||||||||||||||| ||| |||||||||||| |||| ||||||||
Sbjct 250 CTGGATCAGGCTTTCGCCCATTGTCCAAGATTTCCCACTGCTGCCCCCCGCGGGAGTCTG 191
Query 102 GACCGTGTCTCAGTTCCAGTGTG 124
| |||||||| ||| ||||||||
Sbjct 190 GGCCGTGTCTAAGTCCCAGTGTG 168
>seq74662
Length=794
Score = 102 bits (112), Expect = 2e-19
Identities = 97/120 (81%), Gaps = 3/120 (3%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||| |||||||| || |||||||||||||| | || || |||||||| |||||||||
Sbjct 552 CACACGGCATTG-CTCCATCAGGCTTTCGCCTACTGCGGAAAATTCCCCATTGCTGCCTC 610
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
| || |||| |||| |||||||||||| ||| |||| || ||||| ||||| || ||||
Sbjct 611 C-GT-GGAGGCTGGGCCGTGTCTCAGTCCCAATGTGGCTAATCATTCTCTCGAACTAGTT 668
>seq428776
Length=928
Score = 86.0 bits (94), Expect = 1e-14
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||| || ||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 137 CACACGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 195
Query 89 CCGTAGGAGTCTGG 102
||||||||||||||
Sbjct 196 CCGTAGGAGTCTGG 209
>seq97894
Length=709
Score = 86.0 bits (94), Expect = 1e-14
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 81 GCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCA 140
|||||||||||||||||| || |||||||||||| ||| |||| || |||||||||||
Sbjct 559 GCTGCCTCCCGTAGGAGTTTGAGCCGTGTCTCAGTCCCAATGTGGCTAATCATCCTCTCG 618
Query 141 GACCAGTTAC 150
|||||| |||
Sbjct 619 GACCAGCTAC 628
>seq581694
Length=7463
Score = 84.2 bits (92), Expect = 5e-14
Identities = 68/81 (84%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||| ||||| || || |||||||||||||||||| || ||||||||||||||||||
Sbjct 3814 CACACGGCACTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 3872
Query 89 CCGTAGGAGTCTGGACCGTGT 109
| |||||||||||| |||||
Sbjct 3873 CTGTAGGAGTCTGGGGCGTGT 3893
>seq360260
Length=2664
Score = 84.2 bits (92), Expect = 5e-14
Identities = 143/204 (70%), Gaps = 20/204 (10%)
Strand=Plus/Plus
Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCC 195
|||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||||||||
Sbjct 1655 TCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCA 1714
Query 196 GACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT--CTCCCGTAGGAC 253
||| | || | || || | || || ||| |||| || || || |
Sbjct 1715 GACTCAAGCCC--CTCATCGGGC----------GGATTCCTCCTTTTGCTTCCTCAG--C 1760
Query 254 GTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTA 311
|| ||||||||| |||||||| ||| | ||| || ||| ||||| ||| ||
Sbjct 1761 CTACAGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTA 1818
Query 312 GGCATTACTCACCCGTCCGCCGCT 335
| ||||||||||||||||| ||
Sbjct 1819 CGTGTTACTCACCCGTCCGCCACT 1842
>seq50221
Length=719
Score = 80.6 bits (88), Expect = 6e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 82 CTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAG 141
||||||||||||||||| || |||||||||| | ||| |||| || ||||||||||| |
Sbjct 436 CTGCCTCCCGTAGGAGTTTGAGCCGTGTCTCAATCCCAATGTGGCTAATCATCCTCTCGG 495
Query 142 ACCAGTTAC 150
||||| |||
Sbjct 496 ACCAGCTAC 504
>seq509365
Length=1137
Score = 75.2 bits (82), Expect = 2e-11
Identities = 44/46 (96%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCA 113
|| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 861 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCA 816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1063485232640
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