Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq456161 201 2e-49 seq559850 181 2e-43 seq533196 179 8e-43 seq765720 167 5e-39 seq57984 165 2e-38 seq609128 161 2e-37 seq692555 150 4e-34 seq400464 141 2e-31 seq324309 138 2e-30 seq106765 136 8e-30 seq766578 120 6e-25 seq737182 114 3e-23 seq239742 114 3e-23 seq74662 102 2e-19 seq428776 86.0 1e-14 seq97894 86.0 1e-14 seq581694 84.2 5e-14 seq360260 84.2 5e-14 seq50221 80.6 6e-13 seq509365 75.2 2e-11 >seq456161 Length=1433 Score = 201 bits (222), Expect = 2e-49 Identities = 145/166 (87%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||| ||||||| || |||||||||||||||||| Sbjct 402 CACGCGGCATTG-CTCCGTCAGGCTTTCACCCATTGCGGAAAATTCCCCACTGCTGCCTC 460 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| ||||||| ||| |||||||| |||||||||||||| |||||| | Sbjct 461 CCGTAGGAGTCTGGGTCGTGTCTTAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 520 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 || |||| |||||||||| ||| ||| ||||||||||||||||||| Sbjct 521 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 566 >seq559850 Length=11969 Score = 181 bits (200), Expect = 2e-43 Identities = 117/128 (91%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 71 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGAT 130 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct 4902 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGAT 4961 Query 131 CATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCT 190 ||||||||| |||||| ||| |||| |||||||||| ||| ||| ||||||||||||||| Sbjct 4962 CATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCT 5021 Query 191 AATCCGAC 198 |||| ||| Sbjct 5022 AATCAGAC 5029 >seq533196 Length=6825 Score = 179 bits (198), Expect = 8e-43 Identities = 116/127 (91%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 72 TTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATC 131 ||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| Sbjct 2471 TTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATC 2412 Query 132 ATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTA 191 |||||||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||||| Sbjct 2411 ATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTA 2352 Query 192 ATCCGAC 198 ||| ||| Sbjct 2351 ATCAGAC 2345 >seq765720 Length=1578 Score = 167 bits (184), Expect = 5e-39 Identities = 128/152 (84%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||||||||||||||||| || ||||||||||||||||||| ||||||||||| || Sbjct 347 TCAGGCTTTCGCCCATTAAGGAAAATTCCCCACTGCTGCCTCCTATAGGAGTCTGGGCCA 406 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 ||||||||| | || || ||||||||||||| |||||| ||| |||| |||||||||| Sbjct 407 TGTCTCAGTCCTGGTATGGTTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGT 466 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||| ||| |||||||||||||||||| ||| Sbjct 467 AAGCTATTGTCTCACCAACTAGCTAATCAGAC 498 >seq57984 Length=346 Score = 165 bits (182), Expect = 2e-38 Identities = 137/166 (83%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| |||||||| || |||||||||||| |||||| | || ||||||| ||||||||| Sbjct 203 CACACGGCATTG-CTTCATCAGGCTTTCGTCCATTGCCGAAAATTCCCCGTTGCTGCCTC 145 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||||||| ||||| || ||| ||| | ||| | | |||||||||||||||| ||||| | Sbjct 144 TCGTAGGACTCTGGGCCATGTTTCAATCCCAATATAACTGATCATCCTCTCAAACCAGCT 85 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 || |||| ||||||| || || ||| ||||||||||||||||||| Sbjct 84 ACTGATCATCGCCTTAGTAAGTTATTGCCTCACCAACTAGCTAATC 39 >seq609128 Length=9556 Score = 161 bits (178), Expect = 2e-37 Identities = 140/171 (82%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||| |||| |||||||| || |||||||| ||||||||| Sbjct 7348 CACGCGGCATTG-CTCCGTCAGACTTTTGCCCATTGAGGAAAATTCCCCATTGCTGCCTC 7406 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACC-AGT 147 | |||||||| ||| ||||||||||| | | |||| |||||||||||||| ||| | | Sbjct 7407 CTGTAGGAGTTTGGGTCGTGTCTCAGTCCTACTGTGGCTGATCATCCTCTCGTACCAACT 7466 Query 148 TACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||| |||| |||||||||| || ||| |||||| |||||||||||| ||| Sbjct 7467 TACTGATCATCGCCTTGGTATGCTATTGCCTCACAAACTAGCTAATCAGAC 7517 >seq692555 Length=413 Score = 150 bits (166), Expect = 4e-34 Identities = 105/118 (89%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||||||||| || ||||||||||||||||||| || |||||||||||||||||| Sbjct 166 CATGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTAGAAAATTCCCCACTGCTGCCTC 224 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG 146 |||||||||||||| ||||| |||||||||| |||| |||||||||||||| |||||| Sbjct 225 CCGTAGGAGTCTGGGCCGTGCCTCAGTTCCAATGTGGCTGATCATCCTCTCGGACCAG 282 >seq400464 Length=1501 Score = 141 bits (156), Expect = 2e-31 Identities = 131/165 (79%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||||| || ||| || |||| |||||||||||| || |||||||| ||||||||| Sbjct 531 CACGCAGCTTTG-CTCCGTCAGATTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTC 473 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 | ||||||||||| | ||||||| | |||||||| |||||||||| ||| | ||| | Sbjct 472 CTGTAGGAGTCTGCGACTTGTCTCAATCCCAGTGTGGCTGATCATCCGCTCGAATCAGCT 413 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 || ||| || ||||||| | | ||| |||||||||||||||||| Sbjct 412 ACTAATCCTCACCTTGGTAATCTATTGCCTCACCAACTAGCTAAT 368 >seq324309 Length=907 Score = 138 bits (152), Expect = 2e-30 Identities = 102/118 (86%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||||||||| || |||||||||| |||||||| || ||||||||||||| |||| Sbjct 808 CATGCGGCATTG-CTCCGTCAGGCTTTCACCCATTGTAGAAAATTCCCCACTGCTACCTC 750 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG 146 |||||||||||||| |||| |||||||||| |||| |||||||||||||| |||||| Sbjct 749 CCGTAGGAGTCTGGGTCGTGCCTCAGTTCCAATGTGGCTGATCATCCTCTCGGACCAG 692 >seq106765 Length=629 Score = 136 bits (150), Expect = 8e-30 Identities = 124/155 (80%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 50 GGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGT 109 |||||||| |||||| || ||| ||||||||||||||| |||||| ||||| |||| Sbjct 289 GGCTTTCGTCCATTGCAGAAAATTTCCCACTGCTGCCTCCAGTAGGAATCTGGGTTGTGT 348 Query 110 CTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAG 169 |||||| || |||| ||||||||| |||| ||||| ||| ||| | |||||||| || Sbjct 349 CTCAGT-CCTGTGTAGCTGATCATCTTCTCGAACCAGCTACTAATCATTGCCTTGGTAAG 407 Query 170 CCATTACCTCACCAACTAGCTAATCCGACCTAGGC 204 | ||| ||||||||||||||||| ||| || || Sbjct 408 CTATTGTATCACCAACTAGCTAATCAGACGTAAGC 442 >seq766578 Length=9890 Score = 120 bits (132), Expect = 6e-25 Identities = 83/94 (88%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164 ||||||||||| |||||||| || ||||||||||| |||||| ||| |||| |||||||| Sbjct 2896 CGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACCAGCTACTGATCATCGCCTTG 2955 Query 165 GTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || ||| ||| ||||||||||||||||||| ||| Sbjct 2956 GTAAGCGATTGCCTCACCAACTAGCTAATCAGAC 2989 >seq737182 Length=910 Score = 114 bits (126), Expect = 3e-23 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 42 CTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 101 |||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||| Sbjct 560 CTGGATCAGGCTTTCGCCCATTGTCCAAGATTTCCCACTGCTGCCCCCCACGGGAGTCTG 619 Query 102 GACCGTGTCTCAGTTCCAGTGTG 124 | |||||||||||| |||||||| Sbjct 620 GGCCGTGTCTCAGTCCCAGTGTG 642 >seq239742 Length=404 Score = 114 bits (126), Expect = 3e-23 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 42 CTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTG 101 |||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||| Sbjct 250 CTGGATCAGGCTTTCGCCCATTGTCCAAGATTTCCCACTGCTGCCCCCCGCGGGAGTCTG 191 Query 102 GACCGTGTCTCAGTTCCAGTGTG 124 | |||||||| ||| |||||||| Sbjct 190 GGCCGTGTCTAAGTCCCAGTGTG 168 >seq74662 Length=794 Score = 102 bits (112), Expect = 2e-19 Identities = 97/120 (81%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| |||||||| || |||||||||||||| | || || |||||||| ||||||||| Sbjct 552 CACACGGCATTG-CTCCATCAGGCTTTCGCCTACTGCGGAAAATTCCCCATTGCTGCCTC 610 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 | || |||| |||| |||||||||||| ||| |||| || ||||| ||||| || |||| Sbjct 611 C-GT-GGAGGCTGGGCCGTGTCTCAGTCCCAATGTGGCTAATCATTCTCTCGAACTAGTT 668 >seq428776 Length=928 Score = 86.0 bits (94), Expect = 1e-14 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| || ||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 137 CACACGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 195 Query 89 CCGTAGGAGTCTGG 102 |||||||||||||| Sbjct 196 CCGTAGGAGTCTGG 209 >seq97894 Length=709 Score = 86.0 bits (94), Expect = 1e-14 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 81 GCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCA 140 |||||||||||||||||| || |||||||||||| ||| |||| || ||||||||||| Sbjct 559 GCTGCCTCCCGTAGGAGTTTGAGCCGTGTCTCAGTCCCAATGTGGCTAATCATCCTCTCG 618 Query 141 GACCAGTTAC 150 |||||| ||| Sbjct 619 GACCAGCTAC 628 >seq581694 Length=7463 Score = 84.2 bits (92), Expect = 5e-14 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| ||||| || || |||||||||||||||||| || |||||||||||||||||| Sbjct 3814 CACACGGCACTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 3872 Query 89 CCGTAGGAGTCTGGACCGTGT 109 | |||||||||||| ||||| Sbjct 3873 CTGTAGGAGTCTGGGGCGTGT 3893 >seq360260 Length=2664 Score = 84.2 bits (92), Expect = 5e-14 Identities = 143/204 (70%), Gaps = 20/204 (10%) Strand=Plus/Plus Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCC 195 |||| |||||| ||| |||| |||||||||| ||| ||| ||||||||||||||||||| Sbjct 1655 TCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCA 1714 Query 196 GACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT--CTCCCGTAGGAC 253 ||| | || | || || | || || ||| |||| || || || | Sbjct 1715 GACTCAAGCCC--CTCATCGGGC----------GGATTCCTCCTTTTGCTTCCTCAG--C 1760 Query 254 GTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTA 311 || ||||||||| |||||||| ||| | ||| || ||| ||||| ||| || Sbjct 1761 CTACAGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTA 1818 Query 312 GGCATTACTCACCCGTCCGCCGCT 335 | ||||||||||||||||| || Sbjct 1819 CGTGTTACTCACCCGTCCGCCACT 1842 >seq50221 Length=719 Score = 80.6 bits (88), Expect = 6e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 82 CTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAG 141 ||||||||||||||||| || |||||||||| | ||| |||| || ||||||||||| | Sbjct 436 CTGCCTCCCGTAGGAGTTTGAGCCGTGTCTCAATCCCAATGTGGCTAATCATCCTCTCGG 495 Query 142 ACCAGTTAC 150 ||||| ||| Sbjct 496 ACCAGCTAC 504 >seq509365 Length=1137 Score = 75.2 bits (82), Expect = 2e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 68 AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCA 113 || |||||||||||||||||||||||||||||||| |||||||||| Sbjct 861 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCA 816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1063485232640