Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20]
794,288 sequences; 740,035,655 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq456161 197 3e-48
seq559850 161 2e-37
seq533196 159 7e-37
seq765720 154 3e-35
seq609128 129 1e-27
seq692555 122 2e-25
seq57984 122 2e-25
seq400464 114 3e-23
seq324309 113 9e-23
seq106765 105 1e-20
seq737182 96.9 7e-18
seq239742 96.9 7e-18
seq766578 95.1 2e-17
seq74662 93.3 8e-17
seq360260 91.5 3e-16
seq97894 87.8 4e-15
seq50221 82.4 2e-13
seq581694 80.6 5e-13
seq428776 77.0 6e-12
seq509365 75.2 2e-11
>seq456161
Length=1433
Score = 197 bits (218), Expect = 3e-48
Identities = 229/304 (75%), Gaps = 15/304 (5%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||||||||
Sbjct 407 GGCATTGCTCCGTCAGGCTTTCACCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 466
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||| ||||||| ||||||| |||||| | ||| |||||| | || ||||| |||
Sbjct 467 GAGTCTGGGTCGTGTCTTAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 526
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| |||||| ||||||||||| |||||| ||| ||||| || |
Sbjct 527 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAAACGCAAGCCCCTCCTCGG 586
Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240
||| || ||| || | ||| ||||| | | || | ||||||||| ||
Sbjct 587 GCG---GATTTTT--TC-----CTTTTGC--TCCTCAGCC--TACGGGGTATTAGCAGTC 632
Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300
||||||| | ||| |||| ||| || || ||||| || | | |||||||||||||| |
Sbjct 633 GTTTCCAGATGTTGTTCCCCTCCCAAGGGTAGGTT-CTTATGCGTTACTCACCCGTCTGT 691
Query 301 CACT 304
||||
Sbjct 692 CACT 695
>seq559850
Length=11969
Score = 161 bits (178), Expect = 2e-37
Identities = 119/139 (86%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 37 ATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTT 96
|| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct 4902 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGAT 4961
Query 97 CAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCT 156
|| |||||| | || ||||| |||| ||| |||||| |||||| ||||||||||| ||
Sbjct 4962 CATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCT 5021
Query 157 AATCGGCCGCGAGCCCATC 175
|||| | ||| ||||| ||
Sbjct 5022 AATCAGACGCAAGCCCCTC 5040
>seq533196
Length=6825
Score = 159 bits (176), Expect = 7e-37
Identities = 115/133 (86%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 40 CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAA 99
|||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct 2469 CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCAT 2410
Query 100 CCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| | || ||||| |||| ||| |||||| |||||| ||||||||||| |||||
Sbjct 2409 CCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 2350
Query 160 CGGCCGCGAGCCC 172
| | ||| |||||
Sbjct 2349 CAGACGCAAGCCC 2337
>seq765720
Length=1578
Score = 154 bits (170), Expect = 3e-35
Identities = 133/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||||| |||| |||||| | || || |||||||||||||||| ||||||||||||||
Sbjct 347 TCAGGCTTTCGCCCATTAAGGAAAATTCCCCACTGCTGCCTCCTATAGGAGTCTGGGCCA 406
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||||||||| | ||| | ||| |||||| | || ||||| |||| ||| ||||||
Sbjct 407 TGTCTCAGTCCTGGTATGGTTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGT 466
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTT 177
|||||| |||||||||||| |||||| | ||| ||||| ||||
Sbjct 467 AAGCTATTGTCTCACCAACTAGCTAATCAGACGCAAGCCCCTCTT 511
>seq609128
Length=9556
Score = 129 bits (142), Expect = 1e-27
Identities = 135/176 (77%), Gaps = 1/176 (1%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | |||| ||| ||||||| | || || ||||| |||||||||| ||||
Sbjct 7353 GGCATTGCTCCGTCAGACTTTTGCCCATTGAGGAAAATTCCCCATTGCTGCCTCCTGTAG 7412
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGC-TACCGA 119
|||| |||| ||||||||||||| | |||||| | ||| |||||| || | ||| ||
Sbjct 7413 GAGTTTGGGTCGTGTCTCAGTCCTACTGTGGCTGATCATCCTCTCGTACCAACTTACTGA 7472
Query 120 TCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|| ||| |||||| |||||| ||||| ||||| |||||| | | | ||||| ||
Sbjct 7473 TCATCGCCTTGGTATGCTATTGCCTCACAAACTAGCTAATCAGACTCAAGCCCCTC 7528
>seq692555
Length=413
Score = 122 bits (134), Expect = 2e-25
Identities = 90/105 (86%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| |||||||| || || |||||||||||||||||||||
Sbjct 171 GGCATTGCTCCGTCAGGCTTTCGCCCATTGTAGAAAATTCCCCACTGCTGCCTCCCGTAG 230
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTC 105
|||||||||||||| |||||| |||||||||| | ||| ||||||
Sbjct 231 GAGTCTGGGCCGTGCCTCAGTTCCAATGTGGCTGATCATCCTCTC 275
>seq57984
Length=346
Score = 122 bits (134), Expect = 2e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| ||||||| |||| |||||| || || |||| ||||||||| |||||
Sbjct 198 GGCATTGCTTCATCAGGCTTTCGTCCATTGCCGAAAATTCCCCGTTGCTGCCTCTCGTAG 139
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|| |||||||| ||| ||| ||||||| | | | ||| ||||||| || ||||| |||
Sbjct 138 GACTCTGGGCCATGTTTCAATCCCAATATAACTGATCATCCTCTCAAACCAGCTACTGAT 79
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
| ||| ||| || | |||| ||||||||||| ||||||
Sbjct 78 CATCGCCTTAGTAAGTTATTGCCTCACCAACTAGCTAATC 39
>seq400464
Length=1501
Score = 114 bits (126), Expect = 3e-23
Identities = 117/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | |||| |||| ||||||| | || || ||||| |||||||||| ||||||||||
Sbjct 520 GCTCCGTCAGATTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTCCTGTAGGAGTCT 461
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
| | | ||||||| ||||| |||||| | ||| || ||| | ||||| ||| ||
Sbjct 460 GCGACTTGTCTCAATCCCAGTGTGGCTGATCATCCGCTCGAATCAGCTACTAATCCTCAC 401
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| ||||| ||||||||||| |||||
Sbjct 400 CTTGGTAATCTATTGCCTCACCAACTAGCTAAT 368
>seq324309
Length=907
Score = 113 bits (124), Expect = 9e-23
Identities = 88/105 (84%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| |||||||| || || |||||||||| ||||||||||
Sbjct 803 GGCATTGCTCCGTCAGGCTTTCACCCATTGTAGAAAATTCCCCACTGCTACCTCCCGTAG 744
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTC 105
||||||||| |||| |||||| |||||||||| | ||| ||||||
Sbjct 743 GAGTCTGGGTCGTGCCTCAGTTCCAATGTGGCTGATCATCCTCTC 699
>seq106765
Length=629
Score = 105 bits (116), Expect = 1e-20
Identities = 122/163 (75%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75
|| |||| |||||| || || ||||||||||||||| |||||| |||||| ||||
Sbjct 289 GGCTTTCGTCCATTGCAGAAAATTTCCCACTGCTGCCTCCAGTAGGAATCTGGGTTGTGT 348
Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135
|||||| || ||| || | ||| | |||| || ||||| ||| | | |||||| |
Sbjct 349 CTCAGT-CCTGTGTAGCTGATCATCTTCTCGAACCAGCTACTAATCATTGCCTTGGTAAG 407
Query 136 CTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178
||||| | |||||||||| |||||| | || ||||| || ||
Sbjct 408 CTATTGTATCACCAACTAGCTAATCAGACGTAAGCCCCTCCTT 450
>seq737182
Length=910
Score = 96.9 bits (106), Expect = 7e-18
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67
||| |||||| |||| |||||||| ||| || |||||||||||| ||| ||||||||
Sbjct 560 CTGGATCAGGCTTTCGCCCATTGTCCAAGATTTCCCACTGCTGCCCCCCACGGGAGTCTG 619
Query 68 GGCCGTGTCTCAGTCCCAATGTG 90
|||||||||||||||||| ||||
Sbjct 620 GGCCGTGTCTCAGTCCCAGTGTG 642
>seq239742
Length=404
Score = 96.9 bits (106), Expect = 7e-18
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67
||| |||||| |||| |||||||| ||| || |||||||||||| |||| ||||||||
Sbjct 250 CTGGATCAGGCTTTCGCCCATTGTCCAAGATTTCCCACTGCTGCCCCCCGCGGGAGTCTG 191
Query 68 GGCCGTGTCTCAGTCCCAATGTG 90
|||||||||| ||||||| ||||
Sbjct 190 GGCCGTGTCTAAGTCCCAGTGTG 168
>seq766578
Length=9890
Score = 95.1 bits (104), Expect = 2e-17
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130
||||||||||||||| |||||| ||| |||||| | || ||||| |||| ||| ||||
Sbjct 2896 CGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACCAGCTACTGATCATCGCCTTG 2955
Query 131 GTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|| || ||| ||||||||||| |||||| | ||| ||||| ||
Sbjct 2956 GTAAGCGATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCTC 3000
>seq74662
Length=794
Score = 93.3 bits (102), Expect = 8e-17
Identities = 85/105 (81%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| ||||||| |||| || | || | || || ||||| |||||||||| || |
Sbjct 557 GGCATTGCTCCATCAGGCTTTCGCCTACTGCGGAAAATTCCCCATTGCTGCCTCC-GT-G 614
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTC 105
||| |||||||||||||||||||||||||||| ||| |||||
Sbjct 615 GAGGCTGGGCCGTGTCTCAGTCCCAATGTGGCTAATCATTCTCTC 659
>seq360260
Length=2664
Score = 91.5 bits (100), Expect = 3e-16
Identities = 144/204 (71%), Gaps = 17/204 (8%)
Strand=Plus/Plus
Query 102 TCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCG 161
|||| | || ||||| |||| ||| |||||| |||||| ||||||||||| ||||||
Sbjct 1655 TCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCA 1714
Query 162 GCCGCGAGCCCATCTTTCAGCG-ATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGAC 220
| | | ||||| || | ||| || || || ||| ||||| | |
Sbjct 1715 GACTCAAGCCCCTCATCGGGCGGATTCCTCCTTT------------TGCT-TCCTCAGCC 1761
Query 221 ATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCA 280
|| ||||||||| |||||||| ||| |||| ||| || |||||||| || |
Sbjct 1762 --TACAGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTA 1818
Query 281 CGTGTTACTCACCCGTCCGCCACT 304
||||||||||||||||||||||||
Sbjct 1819 CGTGTTACTCACCCGTCCGCCACT 1842
>seq97894
Length=709
Score = 87.8 bits (96), Expect = 4e-15
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 47 GCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCA 106
|||||||||||||||||| || |||||||||||||||||||||||| ||| ||||||
Sbjct 559 GCTGCCTCCCGTAGGAGTTTGAGCCGTGTCTCAGTCCCAATGTGGCTAATCATCCTCTCG 618
Query 107 GTCCGGCTACC 117
| || ||||||
Sbjct 619 GACCAGCTACC 629
>seq50221
Length=719
Score = 82.4 bits (90), Expect = 2e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 48 CTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAG 107
||||||||||||||||| || ||||||||||| |||||||||||| ||| |||||| |
Sbjct 436 CTGCCTCCCGTAGGAGTTTGAGCCGTGTCTCAATCCCAATGTGGCTAATCATCCTCTCGG 495
Query 108 TCCGGCTACC 117
|| ||||||
Sbjct 496 ACCAGCTACC 505
>seq581694
Length=7463
Score = 80.6 bits (88), Expect = 5e-13
Identities = 59/69 (86%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | ||||| |||| ||||||| | || || |||||||||||||||| ||||||||||
Sbjct 3825 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCTGTAGGAGTCT 3884
Query 67 GGGCCGTGT 75
||| |||||
Sbjct 3885 GGGGCGTGT 3893
>seq428776
Length=928
Score = 77.0 bits (84), Expect = 6e-12
Identities = 54/62 (87%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | ||||| |||| ||||||| | || || |||||||||||||||||||||||||||
Sbjct 148 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 207
Query 67 GG 68
||
Sbjct 208 GG 209
>seq509365
Length=1137
Score = 75.2 bits (82), Expect = 2e-11
Identities = 44/46 (96%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 34 AATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCA 79
|| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 861 AAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCA 816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 990469828608
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