Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq782537 75.2 1e-11 seq493742 75.2 1e-11 >seq782537 Length=2192 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 430 CCAACGTAATAGG-ACTGAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 372 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 371 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 334 >seq493742 Length=1287 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 56 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTA 114 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 115 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590620135392