Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20]
794,288 sequences; 740,035,655 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq428777 244 3e-62
seq456161 212 1e-52
seq609128 143 6e-32
seq556442 113 1e-22
seq765721 107 5e-21
seq718370 105 2e-20
seq765720 95.1 3e-17
seq757935 86.0 1e-14
seq625280 82.4 2e-13
seq64879 78.8 2e-12
seq544836 77.0 8e-12
>seq428777
Length=1304
Score = 244 bits (270), Expect = 3e-62
Identities = 301/406 (74%), Gaps = 4/406 (1%)
Strand=Plus/Minus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| | ||||||| ||||||||||||||| ||| || ||| || ||
Sbjct 1253 TGGGGAATAAGCATCAGCTAACTCTGTGCCAGCAGCCGCGATAAGACAAAGGATGCATGC 1194
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
| |||||||||| | ||||||||||| || |||||||| || ||||||| | || |||
Sbjct 1193 GCTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAA 1134
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTG-AAACTGCAGGGCTAGAGTGCAGGAGGGGC 183
| |||||||||||| || || | | || ||| | | ||| |||| | | ||||||
Sbjct 1133 TCCCATGGCTCAACCCTGG-ACAGATGGTGGAAAATACCAAGCTGGAGTACGGTAGGGGC 1075
Query 184 AAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGA 243
| |||||| | ||| |||||||||||||||||| || | | |||||||| ||| |
Sbjct 1074 AGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCAA 1015
Query 244 AGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGAT 303
| || |||||| | | |||||||||||| ||||||| ||||||| || ||||
Sbjct 1014 AAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGAT 955
Query 304 TAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGT 362
||||||||| ||||||| ||||||||||||| |||||||| | | | ||| || |
Sbjct 954 TAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACC 896
Query 363 GCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | ||| | ||| ||||| ||||||| || |||||||||||
Sbjct 895 CGTGCAGTGTTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 850
>seq456161
Length=1433
Score = 212 bits (234), Expect = 1e-52
Identities = 254/345 (74%), Gaps = 0/345 (0%)
Strand=Plus/Minus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60
|| ||| ||| |||| | ||||||| ||||||| ||||||||||| || ||| ||
Sbjct 345 TATTTGGGGAATAAGCATCAGCTAACTCTGTGCCAGTAGCCGCGGTAAGACAGAGGATGC 286
Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120
|||| |||| ||||| | ||||||||||| || |||| ||| || ||||||| | ||
Sbjct 285 AAGCGATATCTGGAATGATTGGGCGTAAAGCGTCTGTAGTTGGCTTTTTAAGTCCGCCGT 226
Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180
||| | | ||||||||| || || | ||| || | ||| |||| | | |||
Sbjct 225 CAAATCCCAGGGCTCAACCTTGGACAGGCAGTGGAAGCTACCAAGCTGGAGTACGGTAGG 166
Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240
| || |||||| | ||| || ||||||||| ||||| || || | |||||||| ||
Sbjct 165 GACAGAGGGAATTTCCGGTGGAGTGGTGAAATGTGTAGAGATCAGAAAGAACACCAACGG 106
Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300
|||| || ||||| | | |||||||||||| ||||||| ||||||| || |
Sbjct 105 CGAAAGCACTCTGCTGCGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGG 46
Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345
|||||||||||| ||||||| ||||||||||||| ||||||||
Sbjct 45 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGG 1
>seq609128
Length=9556
Score = 143 bits (158), Expect = 6e-32
Identities = 244/351 (70%), Gaps = 7/351 (2%)
Strand=Plus/Minus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60
|| ||| ||| |||| || |||||| ||||||||||| || |||| || ||| ||
Sbjct 7291 TATTTGGGGAATAAGCATCGACTAACTCTGTGCCAGCAGCTGCAGTAAGACAGAGGATGC 7232
Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120
|||||||||| |||| | |||| || ||| || ||||||| || ||||||| | ||
Sbjct 7231 AAGCGTTATCCAGAATGATTGGGTGTCAAGCGTCTGTAGGTGACTTTTTAAGTCCGCCGT 7172
Query 121 GAAAGGCTATGGCTCAACCCCGG---GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGG 177
||| | | || ||||||| || ||| | | |||| | | ||| |||| |
Sbjct 7171 CAAATCCCAAGGTTCAACCCTGGATAGACAG---TGGAAATTACCAAGCTGGAGTATGGT 7115
Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237
|||| || ||| || ||| || ||||||||||||||| ||| | ||||||||
Sbjct 7114 AGGGACAGAGGGATTTTTCGGTGGAGAGGTGAAATGCGTAGAGATTGAAAAGAACACCAA 7055
Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297
||||| || | || | | | ||| ||||| || ||||||| ||||||| ||
Sbjct 7054 CAGCGAAAGCACTCTACTAGGCCGACACTAACACTAAGAGACGAAAGCCAGGGGAGCGAA 6995
Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348
||||||| ||||| ||||| | | |||||| |||| ||||| || ||
Sbjct 6994 TGGGATTAG-TACCCCAGTAGTTCTAGTCGTAAATGATGGATACTGGGCGT 6945
>seq556442
Length=3558
Score = 113 bits (124), Expect = 1e-22
Identities = 230/341 (67%), Gaps = 8/341 (2%)
Strand=Plus/Plus
Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64
|| ||| |||| || |||||| || |||||||| || ||| || | | || |||
Sbjct 1121 TGGGGAATAAGCATCGACTAACTCTGTATCAGCAGCCACGATAAGACAGATGATGCAAGC 1180
Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124
||||||||||| | || |||||||| | |||||||| || ||||||| | |||
Sbjct 1181 ATTATCCGGAATGATTGTGCGTAAAGCATATGTAGGTGGCTTTTTAAGTCCACCGACAAA 1240
Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | ||||||| ||| |||| | || |||| | |||||||| | | ||||| |
Sbjct 1241 TCCCAAGGCTCAA-CCCTGGACAGGCAGTGGAACTACCAAGCTAGAGTACGGTAGGGGTA 1299
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAA 244
| |||| ||| || |||||||||| |||| || || | ||||| || | ||||
Sbjct 1300 GAGGTAATTTTCGGTGAAGAGGTGAAATGCATAGACATAAGAAAGAACAGCAACGACGAA 1359
Query 245 GGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATT 304
|| |||| | | |||||||||||| | ||| | | || | |||
Sbjct 1360 AGCAATCTGCTAGGTCGACACTGACACTGAGATACAAAA-------GTTCGAATGGTATT 1412
Query 305 AGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345
||||||| |||||| |||||||||||| |||| |||
Sbjct 1413 AGATACCTCAGTAGTCATATCCGTAAACGATGGATACGAGG 1453
>seq765721
Length=980
Score = 107 bits (118), Expect = 5e-21
Identities = 204/293 (70%), Gaps = 17/293 (6%)
Strand=Plus/Minus
Query 66 TTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAG 125
||||||||||| | ||| |||||| || |||||||| || ||||| | | ||
Sbjct 961 TTATCCGGAATGATAGGGTGTAAAGCGTCTGTAGGTGGCTTTTTAAGCCCGCCGT-CTTT 903
Query 126 GCTATGGCTCAACCCCGGGACTGCT-TTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184
| | ||||||| | |||| | | | |||||| | ||| |||| ||| ||| |||
Sbjct 902 CCCAGGGCTCAA-TCTTGGACAGGTGGTGGAAACTACCAAGCTGGAGTACAGTAGGTGCA 844
Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGA- 243
|||||| || ||| || |||||||||| ||| ||| | |||||||| ||| ||
Sbjct 843 GAGGGAATTTCTGGTGGAGTGGTGAAATGCATAGGGATTGAAAAGAACACCAATGGTGAG 784
Query 244 --------AGGCGGCT--TGCTG-GACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGA 292
| |||| ||| |||| |||||||||||| ||||| | | ||||
Sbjct 783 AACACTCTATTGGGCTGACACTGACACTGACACTGACACTGAGAAACGAAAAC-TAGGGA 725
Query 293 GCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345
|| || |||||||||| ||| |||||| ||||||||||||| ||||||||
Sbjct 724 GCGAATGGGATTAGATA-CCTCATAGTCCTAGCCGTAAACGATGGATACTAGG 673
>seq718370
Length=927
Score = 105 bits (116), Expect = 2e-20
Identities = 129/175 (74%), Gaps = 1/175 (1%)
Strand=Plus/Minus
Query 169 GAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAG 228
|||| | | ||||| | |||||| || ||| |||||||||||||||||| ||||| |
Sbjct 381 GAGTACGGTAGGGGTAGAAGGAATTTCTGGTGGAGCGGTGAAATGCGTAGAGATTAGAAA 322
Query 229 GAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTG 288
|||||||| | || || || |||| | | | ||| |||||||| |||||| |
Sbjct 321 GAACACCAATAGCAAAAGCACTCTGCTAGGC-GACACTAACACTGAGAGATGAAAGCTAG 263
Query 289 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343
||||| ||| ||||||||||||| ||||| ||||||||| | |||| ||
Sbjct 262 GGGAGAAAATGGGATTAGATACCCCAATAGTCGTAGCCGTAAACAACTAATAGTA 208
>seq765720
Length=1578
Score = 95.1 bits (104), Expect = 3e-17
Identities = 181/263 (69%), Gaps = 3/263 (1%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| || |||||| ||||||||| ||||||||| | || || | | |||||||
Sbjct 263 AAGCATCGACTAACTCTGTGCCAGCAACCGCGGTAAGATAGAGTATGCAAACATTATCCG 204
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||| | ||| |||||| || |||||||| || ||||| | | || | | ||
Sbjct 203 GAATGATAGGGTGTAAAGCGTCTGTAGGTGGCTTTTTAAGCCCGCCGT-CTTTCCCAGGG 145
Query 133 CTCAACCCCGGGACTGCT-TTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191
||||| | |||| | | | |||||| | ||| |||| ||| ||| ||| ||||
Sbjct 144 CTCAA-TCTTGGACAGGTGGTGGAAACTACCAAGCTGGAGTACAGTAGGTGCAGAGGGAA 86
Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251
|| || ||| || |||||||||| ||| ||| | |||||||| ||| || |
Sbjct 85 TTTCTGGTGGAGTGGTGAAATGCATAGGGATTGAAAAGAACACCAATGGTGAGAACACTC 26
Query 252 TGCTGGACTGTAACTGACACTGA 274
| ||| ||| |||||||||||
Sbjct 25 TATTGGGCTGACACTGACACTGA 3
>seq757935
Length=1809
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 229 GAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTG 288
|||||||| || ||| || |||||||| | ||||||||||| |||||| |
Sbjct 1 GAACACCAACGGTGAAAGCACTCTGCTGGACCGACACTGACACTGAAAGATGAAAGCTAG 60
Query 289 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345
|||||| || ||||||||||||| ||||||| || |||||| ||| ||||||||
Sbjct 61 GGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCTGTAAACAATGGATACTAGG 117
>seq625280
Length=2029
Score = 82.4 bits (90), Expect = 2e-13
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||||||||| ||||||| ||||||| || |||||||||||| |||||||
Sbjct 1371 ACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGAGATTAGATACCCCAGTAGTCCTA 1430
Query 324 GCCGTAAACGATGAATACTAGGTGT 348
|| |||||||||| |||||||| ||
Sbjct 1431 GCTGTAAACGATGGATACTAGGCGT 1455
>seq64879
Length=874
Score = 78.8 bits (86), Expect = 2e-12
Identities = 64/78 (82%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 37 CAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCG 96
|||||||||||| | ||| || ||||||||||||||| | ||||||||||| || |
Sbjct 759 CAGCCGCGGTAAGATAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTG 818
Query 97 TAGGTGGTTTCTTAAGTC 114
||||||| || |||||||
Sbjct 819 TAGGTGGCTTTTTAAGTC 836
>seq544836
Length=6517
Score = 77.0 bits (84), Expect = 8e-12
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 281 AAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
|||| |||| ||| |||||||| |||||||||||||||||| ||||||||||||||
Sbjct 340 AAAGAATGGGAAGCGAACAGGATCAGATACCCTGGTAGTCCATGCCGTAAACGATGA 284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1193643126784
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