Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20] 794,288 sequences; 740,035,655 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq616751 152 2e-34 seq372185 131 6e-28 seq490453 127 7e-27 seq708156 122 3e-25 seq412124 113 2e-22 seq601044 109 2e-21 seq256729 109 2e-21 seq282508 105 2e-20 seq369996 104 8e-20 seq284897 98.7 3e-18 seq793521 89.7 2e-15 seq125990 84.2 7e-14 seq538621 80.6 9e-13 >seq616751 Length=4941 Score = 152 bits (168), Expect = 2e-34 Identities = 383/571 (67%), Gaps = 37/571 (6%) Strand=Plus/Minus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | | |||||||| | ||||||| ||||| |||||||||| Sbjct 3624 AGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTGTCCATGACCAGGATGAA 3565 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || |||||||||||||| ||| |||||||| ||| || |||||| Sbjct 3564 GCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCAGATGAGT 3505 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTAT 192 ||||| ||||||||||| || | | ||| || |||||||||||| |||||| | Sbjct 3504 TGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGT 3445 Query 193 TTAGGTAGTGCCTCAAGTATCAC---CATC-GGGGGTAGAGCACTGTTATGGCTAGGG-G 247 | ||| || ||| | || ||| |||||| ||||||||| || ||| Sbjct 3444 TGAGGCGCAGC----AGT-TGACTGGAATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCC 3390 Query 248 GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------GCATCAGTTTTAC 299 | | ||| ||||||| | ||||||| |||| | | ||| | || Sbjct 3389 GCGAGAGCG--GTACCAAATCGAGGCAAACTTTGAATACTAGATATGACCTCAAAATAAC 3332 Query 300 CG----------CGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGA 348 | ||| |||||| |||| | |||| | | | ||||||| || | Sbjct 3331 AGGAGTCAAGGTCGGCCAGTGAGACGGTGGGGGATAAGCTTCATCGTCGAGAGGGAAACA 3272 Query 349 ATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATT 408 ||||| | ||||||||||||| |||||| ||| ||| | | || || || | | Sbjct 3271 GCCCGGATCACCAGCTAAGGCCCCTAAATGATCGCTCAGTGATA--AAGGAGGTAGGGGT 3214 Query 409 GCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGC 468 | ||||||| |||| ||| || | |||||||||| | || ||||||||||||| ||| Sbjct 3213 ACAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGC 3155 Query 469 TCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAG 528 ||||| ||||| || ||| || || | |||| |||| ||| ||||||| | Sbjct 3154 TCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGCCGAAGCTG 3096 Query 529 TGGGAT-CATTTATATGATCGGTAGGGGAGC 558 |||||| | ||| |||||||||||||| Sbjct 3095 TGGGATGTAAAAATA-CATCGGTAGGGGAGC 3066 >seq372185 Length=744 Score = 131 bits (144), Expect = 6e-28 Identities = 134/175 (77%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | |||||||||| | |||||||| ||||| |||||||||| Sbjct 343 AGGGCAATTGTCACTGCTTATAGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAA 284 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || |||||||||||||| ||| |||||||| ||| || ||||| | Sbjct 283 GCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGCGT 224 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||| ||||||||||| || | | ||| || |||||||||||| |||||| Sbjct 223 TGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAA 169 >seq490453 Length=754 Score = 127 bits (140), Expect = 7e-27 Identities = 133/175 (76%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | | |||||||| | |||||||| ||||| |||||||||| Sbjct 390 AGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAA 449 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || |||||||||||||| ||| |||||||| ||| || ||||||| Sbjct 450 GCTTGGGTGAAACAAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGT 509 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||| ||||||||||| || | | ||| || |||||||||||| ||||| Sbjct 510 TGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCTCGAAA 564 >seq708156 Length=729 Score = 122 bits (134), Expect = 3e-25 Identities = 132/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||| | ||| ||| | | |||||||| | |||||||| ||||| |||||||||| Sbjct 440 AGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAA 381 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || ||||||||| |||| ||| |||||||| ||| || ||||||| Sbjct 380 GCTTGGGTGAAACTAAGTGGAGGTCCAAACCGACTGATGTTGAAGAATCAGCGGATGAGT 321 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||| ||||||||||| || | | ||| || ||||| |||||| |||||| Sbjct 320 TGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTTGTTCTCCCCGAAA 266 >seq412124 Length=925 Score = 113 bits (124), Expect = 2e-22 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| ||||| |||||||||| | ||| | || |||||||||||||| ||| Sbjct 279 GTGATCTATCCATGATCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACT 220 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167 ||||||||| ||| || ||||||| ||||| ||||||||||| || | | | || Sbjct 219 AATGTTGAAGAATCAGTGGATGAGTTGTGGTTAGGGGTGAAATGCCACTAGAGCCCAGAG 160 Query 168 ATAGCTGGTTCTCTCCGAAA 187 |||||||||||| |||||| Sbjct 159 TTAGCTGGTTCTCCCCGAAA 140 >seq601044 Length=906 Score = 109 bits (120), Expect = 2e-21 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| | |||||||| ||||| ||||||||||| | ||| | || ||||| Sbjct 603 GACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 544 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| || Sbjct 543 GTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGC 486 >seq256729 Length=371 Score = 109 bits (120), Expect = 2e-21 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||||||||||| ||| |||||||||||| || ||||||| ||||| ||||||||||| Sbjct 370 TGGAGGTCCGAACCAACTGATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 311 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 || | | ||| ||| ||||||||||||||||||| Sbjct 310 TGCCACTCGAACCCAGAACTAGCTGGTTCTCTCCGAAA 273 >seq282508 Length=330 Score = 105 bits (116), Expect = 2e-20 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||||||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| Sbjct 33 TGGAGGTCCGAACCAACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 92 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 || | | ||| ||| ||||||||||||||||||| Sbjct 93 TGCCACTCGAACCCAGAACTAGCTGGTTCTCTCCGAAA 130 >seq369996 Length=3461 Score = 104 bits (114), Expect = 8e-20 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 |||| || ||| ||| | | |||||||| | | |||||||| ||||| ||||||| || Sbjct 398 AGGGAGATTGTCACTGTTTATGGACCCGAACCTAGGTGATCTATCCATGACCAGGATTAA 339 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGC 132 | | ||| | || |||||||||||||| ||| || ||||| ||| | ||||| Sbjct 338 GCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATATTGAAGAATCAACATATGAGT 279 Query 133 TGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 ||||| || |||||||| || | ||||| || ||| |||||||| ||||| Sbjct 278 TGTGGTTATGGGTGAAATGCCACTCAAACCCAGAGCTAGTTGGTTCTCCTCGAAA 224 >seq284897 Length=326 Score = 98.7 bits (108), Expect = 3e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 |||||||||| ||| |||||||| ||| || ||||||| ||||| ||||||||||| || Sbjct 63 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 122 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 | ||||| || ||||||||||||||||||| Sbjct 123 ACTCAAACCCAGAGCTAGCTGGTTCTCTCCGAAA 156 >seq793521 Length=3834 Score = 89.7 bits (98), Expect = 2e-15 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 351 CCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGC 410 ||||| | ||||||||||||| |||||| ||| ||| | | || || || | ||| Sbjct 1060 CCGGATCACCAGCTAAGGCCCCTAAATGATTGCTCAGTGATA--AAGGAGGTAGGGGTGC 1003 Query 411 TAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTC 470 ||||||| |||| ||| |||| |||||||||| | || ||||||||||||| | ||| Sbjct 1002 AGAGACAGCCAGGAGGTTTGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAACTC 944 Query 471 ACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530 ||| ||||| || || || || | |||| |||| ||| |||| | ||| Sbjct 943 ACTGATCGAGTGCTCTTGCACCGAAGATGAACGGG-GCTAAGCGATCTGTCGAAACTGTG 885 Query 531 GGAT-CATTTATATGATCGGTAGGGGAGC 558 |||| | ||| |||||||||||||| Sbjct 884 GGATGTAAAAATA-CATCGGTAGGGGAGC 857 >seq125990 Length=498 Score = 84.2 bits (92), Expect = 7e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 |||||||||| ||| |||||||| ||| || ||||||| ||||| ||||| ||||| || Sbjct 404 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGATGAAATGCC 345 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 | | ||| || |||||||||||| |||||| Sbjct 344 ACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAA 311 >seq538621 Length=394 Score = 80.6 bits (88), Expect = 9e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 116 AAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGG 175 ||||| |||||||| ||||| |||||||||||||| || ||| | ||| |||||||| Sbjct 369 AAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGG 310 Query 176 TTCTCTCCGAAAACTATTT 194 || ||| ||||| |||||| Sbjct 309 TTTTCTGCGAAATCTATTT 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1676179709952