Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ruellia_20speciosa_20[genbank_20GCA_5F001909325.1_202016-12-20]
794,288 sequences; 740,035,655 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq664025 93.3 7e-17
seq466402 78.8 2e-12
>seq664025
Length=3750
Score = 93.3 bits (102), Expect = 7e-17
Identities = 90/113 (80%), Gaps = 2/113 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 567 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 624
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
| |||||||||||| | ||| ||||||| |||||||||||||||||| ||||
Sbjct 625 GGCGCGAAGCTACCGTGCGCTAGATTATGACTGAACGCCTCTAAGTCAAAATC 677
>seq466402
Length=729
Score = 78.8 bits (86), Expect = 2e-12
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGA 122
|||||||||||| | ||| ||||||| ||||||||||||||||||||||||| || |||
Sbjct 2 CGCGAAGCTACCGTACGCTAGATTATGACTGAACGCCTCTAAGTCAGAATCCAGGCTAGA 61
Query 123 A 123
|
Sbjct 62 A 62
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 812896530432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |