Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3 187 6e-45 seq1393 120 8e-25 >seq3 Length=15215380 Score = 187 bits (206), Expect = 6e-45 Identities = 245/335 (73%), Gaps = 12/335 (4%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| | Sbjct 10554747 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGGGGCAAGTG 10554688 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT----GTGTAAGACAGGTGTG 123 || ||||||| ||| ||||||||| | || |||||||| | || || || || Sbjct 10554687 TTCTTCGGAATGACTAGGCGTAAAGGGCACGTAGGCGGTTCATCGGGTT-GAAAG---TG 10554632 Query 124 AAATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||| | | | || ||| | | ||| || | || | ||| ||||| | |||| Sbjct 10554631 AAAGTC---GTCAAAAAGTGGCGGAATGCTTTCGAAACCACTGAACTTGAGTGAGACAGA 10554575 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||||| | ||| || ||||||| ||| | | |||||| |||| | Sbjct 10554574 GGAGAGTGGAATTTCGTGTGGAGGGGTGAAATCTACGGATCTACGAAGGAACGCCAAAAG 10554515 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||| | ||||| || |||||| || ||||||| |||||||| ||| | Sbjct 10554514 CGAAGGCAGCTCTCTGGGTCTCTACCGACGCTGGTGTGCGAAAGCATGGGGAGCGAACGG 10554455 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||||||||||| ||| |||||||| Sbjct 10554454 GATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 10554420 >seq1393 Length=1208 Score = 120 bits (132), Expect = 8e-25 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||| | ||||||||| ||||||||||||||||||||| ||| ||| Sbjct 907 TATCTGGGGAATAAGAATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATAAAGAGGATGC 848 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| ||||| || | | |||| | | || Sbjct 847 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGCAGGTGGCTTTTTAAGTCCGCCGT 788 Query 123 GAAATCCCCGGGCTTAACC 141 |||||| ||||| |||| Sbjct 787 CAAATCCTAGGGCTCAACC 769 Score = 116 bits (128), Expect = 1e-23 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||||||||| |||| ||||||||||||||||| ||| ||| Sbjct 302 TATCTGGGGAATAAGCATCGGCTAACTCTGTGCTAGCAGCCGCGGTAATACAGAGGATGC 361 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||| | ||| || | | |||| | | || Sbjct 362 AAGCGTTATCCGGAATGATTGGGCGTAAAGCATCTATAGGTGGCTTTTTAAGTCCGCCGT 421 Query 123 GAAATCCCCGGGCTTAACC 141 ||||||| ||||| |||| Sbjct 422 TAAATCCCAGGGCTCAACC 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289581210528