Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3 185 3e-44 >seq3 Length=15215380 Score = 185 bits (204), Expect = 3e-44 Identities = 349/499 (70%), Gaps = 26/499 (5%) Strand=Plus/Plus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 10579355 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 10579414 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 10579415 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 10579474 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 10579475 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 10579534 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325 ||||||||||| ||||| |||||| | | |||||||| || | | | | | Sbjct 10579535 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTAGAAG 10579593 Query 326 CCCTATTCGGACTCGCTTTCGCTA-CGGCTACCCCACACGGGTTAA-CCTCGCGACACAA 383 |||| || |||| | | || |||| || | || |||| || | | | || Sbjct 10579594 ----ATTC-CAC---CTTTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTCTTCCCAT 10579645 Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCA-CCTG-GTAC-CTAAAAGGC 440 | ||||| | | ||| | ||||||| ||||||| | || || | || Sbjct 10579646 TTC---CTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCT-----TG 10579697 Query 441 ACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT--ACTATTTCACTCCCCGCCA 498 ||| | || |||| |||||| ||| | | |||||| ||||| ||||||| | Sbjct 10579698 ACTACTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCGTCAT 10579757 Query 499 GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558 |||| |||||||||||||||||||||||||||| |||||||||||| |||| || || Sbjct 10579758 AGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTT 10579817 Query 559 AGGCTTAACGGGTGGTCCC 577 ||||||| |||||||||| Sbjct 10579818 AGGCTTAGAGGGTGGTCCC 10579836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817573517568