Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1393 188 1e-45 seq1 123 5e-26 seq3 102 2e-19 seq6 100 6e-19 >seq1393 Length=1208 Score = 188 bits (208), Expect = 1e-45 Identities = 148/177 (84%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| ||||||| ||| ||||||| | || || ||||||||||||||||||||| Sbjct 240 GGCATTGCTCCATCAGGCTTTTGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 181 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||| |||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 180 GAGTCTAGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACAGAT 121 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTT 177 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| |||| Sbjct 120 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCTT 64 Score = 158 bits (174), Expect = 2e-36 Identities = 140/175 (80%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||| ||||||||||||| ||| Sbjct 969 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCTACTGCTGCCTCCCATAG 1028 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 1029 GAGTCTGGGCCGTGTCTCAGTCCCACTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1088 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 ||| |||||| |||||| || ||||||| |||||| | | |||||| || Sbjct 1089 TATCGCCTTGGTAAGCTATTGCCTGGCCAACTAGCTAATCAGACAAGAGCCCCTC 1143 >seq1 Length=19836964 Score = 123 bits (136), Expect = 5e-26 Identities = 97/116 (84%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 60 GGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGA 119 |||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| || Sbjct 14157783 GGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGA 14157724 Query 120 TCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||||| |||||| ||||||||||| |||||| | || |||||| || Sbjct 14157723 TAATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGGGAGCCCCTC 14157668 >seq3 Length=15215380 Score = 102 bits (112), Expect = 2e-19 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 10554822 GCTGGATCAGGCTTGCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 10554881 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGC 92 |||||||||||||||||| |||||| Sbjct 10554882 GGGCCGTGTCTCAGTCCCGGTGTGGC 10554907 >seq6 Length=18523719 Score = 100 bits (110), Expect = 6e-19 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 26 CATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 85 ||||| | || || ||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 10509666 CATTGCGGAAAATTCCCCAGTGCTGCCTCCCATAGGAGTCTGGGCCGTGTCTCAGTCCCA 10509725 Query 86 ATGTGGCCGTTCAACCTCTC 105 |||||| | ||| |||||| Sbjct 10509726 GTGTGGCTGATCATCCTCTC 10509745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998385453312