Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 178 1e-39 >seq2 Length=13294645 Score = 178 bits (196), Expect = 1e-39 Identities = 373/547 (68%), Gaps = 13/547 (2%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| ||||| || |||||||||| || || |||||| | || ||||| Sbjct 9186188 ATGTACAAGAAGGCCGAAGCATCTTTCTGGACGGCCGAAGAAGTCGATCTTTCGCAAGAC 9186247 Query 61156 ATGAATGACTGGGAGCGTTTAT-CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 ||||||||| | || ||| ||| |||| ||| ||||| ||||| || | || Sbjct 9186248 GGTCGCGACTGGGAGAATCTAAACGA-CGGCGAACGACACTTCATCAAACACGTACTCGC 9186306 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| ||||| || ||||| ||||| |||||| | || || | || Sbjct 9186307 CTTCTTCGCCGCCTCAGACGGAATCGTTCTGGAGAATCTCGCTTCCCGATTTATGTCCGA 9186366 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 |||||||| |||||||||||| ||||||||| |||||||| || || ||||| | || Sbjct 9186367 TGTGCAAGTCTCGGAGGCGCGTGCTTTCTACGGTTTCCAGATCGCGATTGAGAACATACA 9186426 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||| |||||||||||| | ||| |||| || ||||||| ||| || | || | Sbjct 9186427 CTCCGAGATGTACAGTCTCCTCCTCGACACTTACATCAAGGACAACAAAGAGAGAGACCA 9186486 Query 61395 ATTGTTCAATGCCATCGAGACGATACC-GGCG--GTGAAGCGGAAAGCGGATTGGGCCTT 61451 | ||| || ||||| || || || ||| | || |||||| | ||||| | Sbjct 9186487 TCTCTTCCGCGCGATCGAAACCATCCCTTGCGTCGCCAA---GAAAGCCCAGTGGGCGAT 9186543 Query 61452 CAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 || ||||| | | | | || |||| || || | | || || || || Sbjct 9186544 GAAGTGGAT---CGATGGATCTCAGACTTTTGCCGAGAGAATCGTCGCTTTCGCCTGTGT 9186600 Query 61512 CGAGGGTGTATTTTTCAGTGG-ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 ||| ||| | || ||| || | | | || | | || || ||| |||| || || || | Sbjct 9186601 CGAAGGTATCTTCTTCTCCGGTAGCTTCTG-CTCGATTTTCTGGCTGAAAAAGCGAGGTC 9186659 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | |||||||| | |||||| ||| |||||||| ||||| ||||| ||| | ||||| | Sbjct 9186660 TCATGCCCGGATTAACCTTCTCCAACGAGTTGATCTCACGAGACGAAGGCTTACATTGCG 9186719 Query 61631 ATTTTGC 61637 |||| || Sbjct 9186720 ATTTCGC 9186726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560940310480