Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq113 113 5e-20 seq2 113 5e-20 seq4 95.1 1e-14 >seq113 Length=54118 Score = 113 bits (124), Expect = 5e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 160969 TATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGT 161028 || ||||| ||||| || || |||||||| | || || ||||| || ||||||||| Sbjct 24709 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 24650 Query 161029 GCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCT 161088 ||||||| | ||||| ||||| ||| ||| |||| || || ||||| || | Sbjct 24649 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 24590 Query 161089 TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACT 161148 ||||| |||||||| || ||| ||| ||||| || || || | |||||||| ||| Sbjct 24589 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 24530 Query 161149 TCTGATGTAACTATT 161163 |||||||| || ||| Sbjct 24529 TCTGATGTTACCATT 24515 >seq2 Length=13294645 Score = 113 bits (124), Expect = 5e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 160969 TATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGT 161028 || ||||| ||||| || || |||||||| | || || ||||| || ||||||||| Sbjct 3079479 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 3079538 Query 161029 GCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCT 161088 ||||||| | ||||| ||||| ||| ||| |||| || || ||||| || | Sbjct 3079539 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 3079598 Query 161089 TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACT 161148 ||||| |||||||| || ||| ||| ||||| || || || | |||||||| ||| Sbjct 3079599 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 3079658 Query 161149 TCTGATGTAACTATT 161163 |||||||| || ||| Sbjct 3079659 TCTGATGTTACCATT 3079673 >seq4 Length=14320061 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019 ||||| ||||| | | || || ||||| || ||||| |||||| || ||||| || Sbjct 14002797 GATGACCAATACATATTGGATGCAGCTGAAGAGGCAGGAGTTGACTTGCCTTACTCTTGC 14002856 Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079 | || ||||| || || ||||| ||||||||||| |||| ||| || ||||| ||| Sbjct 14002857 AGAGCCGGTGCGTGTTCCACTTGCGCTGGTAAGATCGAGAAAGGTCAGGTTGATCAGTCT 14002916 Query 161080 GATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCT 161139 ||| || || || || || ||||| | || ||| | |||| |||| || || ||| Sbjct 14002917 GATGGTTCGTTTCTTGAGGAAGATCACTTGGAGAAAGGGTATGTCTTGACTTGTGTGGCT 14002976 Query 161140 TATCC 161144 || || Sbjct 14002977 TACCC 14002981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551365958064600