Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq113 113 5e-20
seq2 113 5e-20
seq4 95.1 1e-14
>seq113
Length=54118
Score = 113 bits (124), Expect = 5e-20
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 160969 TATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGT 161028
|| ||||| ||||| || || |||||||| | || || ||||| || |||||||||
Sbjct 24709 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 24650
Query 161029 GCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCT 161088
||||||| | ||||| ||||| ||| ||| |||| || || ||||| || |
Sbjct 24649 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 24590
Query 161089 TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACT 161148
||||| |||||||| || ||| ||| ||||| || || || | |||||||| |||
Sbjct 24589 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 24530
Query 161149 TCTGATGTAACTATT 161163
|||||||| || |||
Sbjct 24529 TCTGATGTTACCATT 24515
>seq2
Length=13294645
Score = 113 bits (124), Expect = 5e-20
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 160969 TATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGT 161028
|| ||||| ||||| || || |||||||| | || || ||||| || |||||||||
Sbjct 3079479 TACGTCCTCGACGCGGCGGAGGAAGCAGGGATCGATTTGCCTTACTCTTGCCGTGCTGGT 3079538
Query 161029 GCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCT 161088
||||||| | ||||| ||||| ||| ||| |||| || || ||||| || |
Sbjct 3079539 TCTTGCTCGAGCTGTGCCGGTAAAGTTGTAGCTGGATCTGTTGACCAGTCTGACCAGAGT 3079598
Query 161089 TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACT 161148
||||| |||||||| || ||| ||| ||||| || || || | |||||||| |||
Sbjct 3079599 TTCCTTGATGATGACCAGATTGGTGAAGGGTTTGTTCTCACTTGTGCGGCTTATCCTACT 3079658
Query 161149 TCTGATGTAACTATT 161163
|||||||| || |||
Sbjct 3079659 TCTGATGTTACCATT 3079673
>seq4
Length=14320061
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019
||||| ||||| | | || || ||||| || ||||| |||||| || ||||| ||
Sbjct 14002797 GATGACCAATACATATTGGATGCAGCTGAAGAGGCAGGAGTTGACTTGCCTTACTCTTGC 14002856
Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079
| || ||||| || || ||||| ||||||||||| |||| ||| || ||||| |||
Sbjct 14002857 AGAGCCGGTGCGTGTTCCACTTGCGCTGGTAAGATCGAGAAAGGTCAGGTTGATCAGTCT 14002916
Query 161080 GATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCT 161139
||| || || || || || ||||| | || ||| | |||| |||| || || |||
Sbjct 14002917 GATGGTTCGTTTCTTGAGGAAGATCACTTGGAGAAAGGGTATGTCTTGACTTGTGTGGCT 14002976
Query 161140 TATCC 161144
|| ||
Sbjct 14002977 TACCC 14002981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551365958064600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |