Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21] 1,457 sequences; 137,073,209 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq5 104 3e-17 >seq5 Length=16150104 Score = 104 bits (114), Expect = 3e-17 Identities = 229/341 (67%), Gaps = 3/341 (1%) Strand=Plus/Plus Query 164398 TCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGGCATCC 164457 |||||| || | || |||| | | ||||| || |||||||| | || || || || | Sbjct 10049270 TCCAAGTGTTTTAAAATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATAC 10049329 Query 164458 TTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTTGAAG 164517 | || | |||| |||| || ||||||||||||||| ||| | || ||| | | || Sbjct 10049330 TGGGCGCTGCTTTTCTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAA 10049389 Query 164518 ATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGACTTACT 164577 ||||| | ||||||| || | || || | | | ||||| ||||| ||||| | Sbjct 10049390 ATGGTAATGGTGCAAATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATT 10049449 Query 164578 CGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGC 164637 | ||| |||| || ||| |||| | || || || ||||| |||| || ||||| Sbjct 10049450 CAATGTTCACCGCAAACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAA 10049509 Query 164638 GTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTG 164697 || ||| | || |||||| | ||||| | ||| || | | || | ||| || ||| Sbjct 10049510 GTCAGTT--ATTTATTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTTG 10049567 Query 164698 GTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTT 164738 | | || ||| || | || || ||||| |||| |||| Sbjct 10049568 GAGTAGTC-TTCTAGCTTTTAACCTACGTGCCTATGGTTTT 10049607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559317813238800