Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schrenkiella_20parvula_20[genbank_20GCA_5F000218505.1_202011-06-21]
1,457 sequences; 137,073,209 total letters
Query= NC_031922.1
Length=174830
Score E
Sequences producing significant alignments: (Bits) Value
seq5 104 3e-17
>seq5
Length=16150104
Score = 104 bits (114), Expect = 3e-17
Identities = 229/341 (67%), Gaps = 3/341 (1%)
Strand=Plus/Plus
Query 164398 TCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGGCATCC 164457
|||||| || | || |||| | | ||||| || |||||||| | || || || || |
Sbjct 10049270 TCCAAGTGTTTTAAAATTGGATATTGAACCCATTTTATATGATGAGAGTCGCCGGTATAC 10049329
Query 164458 TTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTTGAAG 164517
| || | |||| |||| || ||||||||||||||| ||| | || ||| | | ||
Sbjct 10049330 TGGGCGCTGCTTTTCTATGCACTATTCATGGTGCTATTGTAAAATATCTTTTATATAAAA 10049389
Query 164518 ATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGACTTACT 164577
||||| | ||||||| || | || || | | | ||||| ||||| ||||| |
Sbjct 10049390 ATGGTAATGGTGCAAATACATTAGATGCTTTTAATACAAATCAAGTCGAAGAAACTTATT 10049449
Query 164578 CGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGC 164637
| ||| |||| || ||| |||| | || || || ||||| |||| || |||||
Sbjct 10049450 CAATGTTCACCGCAAACTGCTTTTTATCACAAATATTTGGGGTTGCGTTTTCCAATAGAA 10049509
Query 164638 GTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTG 164697
|| ||| | || |||||| | ||||| | ||| || | | || | ||| || |||
Sbjct 10049510 GTCAGTT--ATTTATTTATGTTATTTGTACTTGTAATTGATATGTGTATGAGTGCTCTTG 10049567
Query 164698 GTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTT 164738
| | || ||| || | || || ||||| |||| ||||
Sbjct 10049568 GAGTAGTC-TTCTAGCTTTTAACCTACGTGCCTATGGTTTT 10049607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559317813238800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |