Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq16236 141 1e-31 seq4 141 1e-31 seq8 140 5e-31 seq91 134 2e-29 seq13 111 2e-22 seq3439 89.7 7e-16 seq2 86.0 9e-15 seq3 80.6 4e-13 seq11 75.2 2e-11 seq16 73.4 5e-11 >seq16236 Length=153324 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 106488 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 106430 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 106429 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 106383 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 106382 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 106329 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 106328 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 106269 Query 246 GTA 248 ||| Sbjct 106268 GTA 106266 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 132007 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 132065 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 132066 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 132112 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 132113 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 132166 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 132167 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 132226 Query 246 GTA 248 ||| Sbjct 132227 GTA 132229 >seq4 Length=17356267 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 13321049 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 13320991 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 13320990 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 13320944 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 13320943 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 13320890 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 13320889 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 13320830 Query 246 GTA 248 ||| Sbjct 13320829 GTA 13320827 >seq8 Length=21523998 Score = 140 bits (154), Expect = 5e-31 Identities = 179/244 (73%), Gaps = 22/244 (9%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 13626077 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 13626019 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 13626018 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 13625972 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 13625971 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 13625918 Query 186 TAACCACAGTTCACCCGAACGCCTTAG-TATTCTCTACCTGACCACCTGTGTCGGTTTAC 244 || | |||| | || | |||||| |||||||||||| | |||||||||||||| | Sbjct 13625917 TAGAGAGAGTTGTCACGCGC-CCTTAGGTATTCTCTACCTACCTACCTGTGTCGGTTTCC 13625859 Query 245 GGTA 248 |||| Sbjct 13625858 GGTA 13625855 >seq91 Length=122179 Score = 134 bits (148), Expect = 2e-29 Identities = 177/243 (73%), Gaps = 12/243 (5%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 15573 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 15515 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 15514 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 15457 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | |||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct 15456 T--------AGGAGAG-CACCCCTTTTCCCGAAGTTACCGGGTCATTTTGCCGAGTTCCT 15406 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | | |||| | | | |||| | |||| |||||| || ||||||||||||||| | Sbjct 15405 TCGACGTGGTTCTCTCAAGCGCCCTGGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 15346 Query 246 GTA 248 ||| Sbjct 15345 GTA 15343 >seq13 Length=5050363 Score = 111 bits (122), Expect = 2e-22 Identities = 161/226 (71%), Gaps = 25/226 (11%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| | |||| Sbjct 1874719 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGTGGAGACC 1874777 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || ||| |||| || Sbjct 1874778 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGGGACCCCC-------------- 1874823 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 || | || || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1874824 ---TTTATGAGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAGTTCCT 1874878 Query 186 TAACCACAGTTCACCCGAACGC--CTTAGTATTCTCTACCTGACCA 229 || | |||| | | |||| || |||||||||| ||| |||| Sbjct 1874879 TAGAAAGAGTTGTCTC--ACGCCTCTAAGTATTCTCTGCCT-ACCA 1874921 >seq3439 Length=505 Score = 89.7 bits (98), Expect = 7e-16 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 ||||||||||||| ||||||| |||| ||||||||||| |||||| || |||| | | Sbjct 167 GCACCCCTTCTCCTGAAGTTATGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTC 226 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | || | |||||| |||||| || |||||||| ||||| |||| Sbjct 227 AAGCGTCCTAGTATACTCTACTTGTTCACCTGTGATGGTTTGGGGTA 273 >seq2 Length=18500646 Score = 86.0 bits (94), Expect = 9e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 ||||| ||||||||||||||| |||| |||||||||| ||||||| | |||| | | Sbjct 9237436 GCACCTTTTCTCCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTC 9237495 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 | | ||| ||||||||||||| |||||||||| Sbjct 9237496 GTGCCCCTAGGTATTCTCTACCTACCCACCTGTGT 9237530 >seq3 Length=24928530 Score = 80.6 bits (88), Expect = 4e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 ||||||||||||| || || |||| ||||||||||| |||||| || |||| | | Sbjct 5630149 GCACCCCTTCTCCTAAAACTATGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTC 5630208 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | |||| || ||| |||||| || ||| ||||||||||| |||| Sbjct 5630209 AAGCGCCCTAATATACTCTACTTGTTCACTTGTGTCGGTTTGGGGTA 5630255 >seq11 Length=15446199 Score = 75.2 bits (82), Expect = 2e-11 Identities = 70/88 (80%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 10652225 CCTTCCGGCACTGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 10652167 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCT 93 |||||||||| |||||| ||||| |||| Sbjct 10652166 TGTGTTTTTAATAAACAATCGCTACCCT 10652139 >seq16 Length=4963887 Score = 73.4 bits (80), Expect = 5e-11 Identities = 66/82 (80%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | |||| || || || |||| Sbjct 4894455 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTGTGCGGAGACC 4894397 Query 66 TGTGTTTTTAGTAAACAGTCGC 87 ||||||||| |||||||||||| Sbjct 4894396 TGTGTTTTTGGTAAACAGTCGC 4894375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694290780428