Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq16236 107 2e-21 seq16 107 2e-21 seq8 93.3 5e-17 seq10 80.6 3e-13 seq51 75.2 1e-11 seq5 75.2 1e-11 seq1 73.4 4e-11 >seq16236 Length=153324 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 106707 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 106648 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 106647 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 106589 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 106588 ACAAGGAATTTCGCTACCTTAGGACCGTTA 106559 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 131788 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 131847 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 131848 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 131906 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 131907 ACAAGGAATTTCGCTACCTTAGGACCGTTA 131936 >seq16 Length=4963887 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 4894674 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 4894615 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 4894614 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 4894556 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 4894555 ACAAGGAATTTCGCTACCTTAGGACCGTTA 4894526 >seq8 Length=21523998 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 13626208 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGCACCGTT 13626149 Query 173 A 173 | Sbjct 13626148 A 13626148 >seq10 Length=17245970 Score = 80.6 bits (88), Expect = 3e-13 Identities = 90/122 (74%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 47 GTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNN 105 ||| || |||||||||| |||| | ||||||| |||| | | | ||||||| Sbjct 2204401 GTAGTCCGCATCTTCACAGATATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGTGCCC 2204343 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 |||||| |||||| |||||||||||||| |||||| |||||| ||||||||| Sbjct 2204342 AGATCTTTACACCTTTCGTGTGGGTCGGAACTTACCAGACAAGAAATTTCTCTACCTTAG 2204283 Query 166 GA 167 || Sbjct 2204282 GA 2204281 >seq51 Length=251980 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || || ||| ||||| ||||||||| ||||||||||||||||||||||||||| | Sbjct 166982 TACGCCTTTTGTGTGGGTCGAAACTTACCCAACAAGGAATTTCGCTACCTTAGGACCGCT 167041 Query 173 A 173 | Sbjct 167042 A 167042 >seq5 Length=18898134 Score = 75.2 bits (82), Expect = 1e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 168 ||| || || ||| |||||||||||| ||||||||||||||| ||||||||||||| Sbjct 10816946 TACGCCTTTTGTGTAGGTCGGAACTTGCCCGACAAGGAATTTTGCTACCTTAGGAC 10817001 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || || ||| ||||| ||||||||| ||||||||||||||||||||||||||| | Sbjct 11148531 TACGCCTTTTGTGTGGGTCGAAACTTACCCAACAAGGAATTTCGCTACCTTAGGACCGCT 11148472 Query 173 A 173 | Sbjct 11148471 A 11148471 >seq1 Length=18577331 Score = 73.4 bits (80), Expect = 4e-11 Identities = 40/40 (100%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 128 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 167 |||||||||||||||||||||||||||||||||||||||| Sbjct 7172466 GGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 7172505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547113932964