Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq16236 226 6e-57 seq89 214 4e-53 seq7 214 4e-53 seq3 150 4e-34 seq1 123 5e-26 >seq16236 Length=153324 Score = 226 bits (250), Expect = 6e-57 Identities = 239/309 (77%), Gaps = 18/309 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 101086 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 101028 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 101027 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 100968 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 100967 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCT 100908 Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268 | | || | || ||| | || || || || | || | ||||||||| Sbjct 100907 C--------CTCGGGCGGA--TTCCTCCTTTTGCT-CCTCAG--CCTACGGGGTATTAGC 100861 Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326 |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||| Sbjct 100860 AGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCG 100803 Query 327 TCCGCCGCT 335 |||||| || Sbjct 100802 TCCGCCACT 100794 Score = 226 bits (250), Expect = 6e-57 Identities = 239/309 (77%), Gaps = 18/309 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 137409 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 137467 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 137468 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 137527 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 137528 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCT 137587 Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268 | | || | || ||| | || || || || | || | ||||||||| Sbjct 137588 C--------CTCGGGCGGA--TTCCTCCTTTTGCT-CCTCAG--CCTACGGGGTATTAGC 137634 Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326 |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||| Sbjct 137635 AGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCG 137692 Query 327 TCCGCCGCT 335 |||||| || Sbjct 137693 TCCGCCACT 137701 >seq89 Length=122847 Score = 214 bits (236), Expect = 4e-53 Identities = 150/170 (88%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || || ||||||||||||||| || |||||||||||||||||| Sbjct 117072 CACGCGGCATTG-CTCCGTCCGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 117014 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 117013 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 116954 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 116953 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 116904 >seq7 Length=11725536 Score = 214 bits (236), Expect = 4e-53 Identities = 150/170 (88%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| ||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 1725604 CACGCGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1725662 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 1725663 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 1725722 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 1725723 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 1725772 >seq3 Length=24928530 Score = 150 bits (166), Expect = 4e-34 Identities = 131/162 (81%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 39 TGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 98 ||||| ||| | |||| ||||||||| || |||||||||||||||||| ||||||||| Sbjct 3271910 TGGCTCCATCTAGATTTCACCCATTGTCGAAAATTCCCCACTGCTGCCTCTCGTAGGAGT 3271969 Query 99 CTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTAC--GGATCG 156 |||| || |||| || |||||||| ||| |||||||||| |||||| ||| |||| Sbjct 3271970 TTGGATCGGGTCTTCGTCCCAGTGTGGCTGGTCATCCTCTCGGACCAGCTACTGTGATCA 3272029 Query 157 TCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||||||| || ||| ||| ||||||| ||||||||| ||| Sbjct 3272030 TCGCCTTAGTAAGCTATTGTTTCACCAATTAGCTAATCAGAC 3272071 Score = 123 bits (136), Expect = 5e-26 Identities = 130/170 (76%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||||||||| || |||||||||| ||| |||| || ||| |||||| |||||| Sbjct 15902814 CATGCGGCATTG-CTCCGTCAGGCTTTCACCCGTTGTGGAAAATTTTCCACTGTTGCCTC 15902872 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 | |||| ||| ||| |||||||| ||| | ||||| |||||||| ||| ||| || | Sbjct 15902873 CTGTAGAAGTTTGGGCCGTGTCTTAGTCGCTGTGTGGTTGATCATCATCTTAGATCAACT 15902932 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || ||| | ||||| ||| ||| |||||||||||||||||| ||| Sbjct 15902933 ACTAATCACTGTTTTGGTAAGCTATTGGCTCACCAACTAGCTAATCAGAC 15902982 >seq1 Length=18577331 Score = 123 bits (136), Expect = 5e-26 Identities = 130/170 (76%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| |||||||| || |||| |||||||||| | || |||||| ||| |||| || Sbjct 7205386 CACACGGCATTG-CTCCGTCAGACTTTCGCCCACTAAGGAAAATTCCCGACTACTGCTTC 7205328 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 || ||||||||| | ||||||| ||| | ||||||| || ||||||||||| ||| | Sbjct 7205327 CCTTAGGAGTCTAGGCCGTGTCCCAGCCCATGTGTGACCGACTATCCTCTCAGAACAGCT 7205268 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 | |||| ||| |||| | | | ||| |||||||||||| ||||| ||| Sbjct 7205267 ATTGATCATCGTCTTGATAAACTATTGCCTCACCAACTAATTAATCAGAC 7205218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071825950080