Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01001210.1 Length=647 Score E Sequences producing significant alignments: (Bits) Value seq10 87.8 7e-15 >seq10 Length=17245970 Score = 87.8 bits (96), Expect = 7e-15 Identities = 122/168 (73%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 273 GCTGCTCCAAAGAGGAAAAGGCCAAGGCAAGTAATGGAAAATCATGGAGGATTTGGTATA 332 || || || ||||| ||||||||||||||||| || ||| | | || | ||| Sbjct 512418 GCAGCGCCGAAGAGAAAAAGGCCAAGGCAAGTGCCCGAGAAT--TCG-GGCTACGGTGCC 512362 Query 333 AGGAGCAGCCCCATTTCGGCTAAAGTGGAGATGGATCAAACAACAATGAAGATGGAGGTT 392 |||||||||||||||| || || || || ||||| ||| ||| ||| ||| || Sbjct 512361 CGGAGCAGCCCCATTTCTGCGAAGCCTGATATAGATCAGACACCAA---AGAGTGAGATT 512305 Query 393 TCTTCTCCTAATTTGGAGAAGACCCCACAATCTACAGCGGAAAATGGA 440 || ||||||||||||||||| | | || ||| |||| ||||| ||| Sbjct 512304 TCATCTCCTAATTTGGAGAAAATCTCAGGATCCGCAGCTGAAAACGGA 512257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1964471026168