Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq16236 210 5e-52 seq8 187 6e-45 seq91 102 2e-19 seq3 95.1 3e-17 seq2 78.8 2e-12 seq4 75.2 3e-11 >seq16236 Length=153324 Score = 210 bits (232), Expect = 5e-52 Identities = 306/415 (74%), Gaps = 17/415 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 105408 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 105352 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 105351 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 105296 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | |||||| ||||||||| |||||||||| |||| | ||| |||| | Sbjct 105295 GAC-AATTGCCCTATGAAGACTCGC-TTTCGCTACGGCTCCGGTGGGTTCCCTTAA-CCA 105239 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 105238 AGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAGGCTTT 105182 Query 247 G-GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 | ||||||||||||| || |||||||||| | ||||||||||||||| | |||| Sbjct 105181 GCTCCTCCCACTGCTTGAGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGAT-GGGGG 105123 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 |||||||| || |||||||||||||||| ||| |||||||||| ||| ||||||||||| Sbjct 105122 TTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCC 105063 Query 366 TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||| | | |||||| | ||||| || || | |||| || | ||||||| Sbjct 105062 TTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGTCCCATGCTACTCG 105008 Score = 210 bits (232), Expect = 5e-52 Identities = 306/415 (74%), Gaps = 17/415 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 133087 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 133143 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 133144 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 133199 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | |||||| ||||||||| |||||||||| |||| | ||| |||| | Sbjct 133200 GAC-AATTGCCCTATGAAGACTCGC-TTTCGCTACGGCTCCGGTGGGTTCCCTTAA-CCA 133256 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 133257 AGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAGGCTTT 133313 Query 247 G-GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 | ||||||||||||| || |||||||||| | ||||||||||||||| | |||| Sbjct 133314 GCTCCTCCCACTGCTTGAGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGAT-GGGGG 133372 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 |||||||| || |||||||||||||||| ||| |||||||||| ||| ||||||||||| Sbjct 133373 TTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCC 133432 Query 366 TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||| | | |||||| | ||||| || || | |||| || | ||||||| Sbjct 133433 TTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGTCCCATGCTACTCG 133487 >seq8 Length=21523998 Score = 187 bits (206), Expect = 6e-45 Identities = 301/415 (73%), Gaps = 17/415 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 13624997 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 13624941 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 13624940 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 13624885 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | | |||| ||||||||| |||||||||| |||| | ||| |||| | Sbjct 13624884 GAC-AATTGACCTATGAAGACTCGC-TTTCGCTACGGCTCCGGTGGGTTCCCTTAA-CCA 13624828 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | Sbjct 13624827 AGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GAGGCTTT 13624771 Query 247 G-GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 | ||||||||||||| || || ||||||| | |||| ||||||| || | |||| Sbjct 13624770 GCTCCTCCCACTGCTTGAGAGCTTAAGGTTTCATGTTCTAATTCACTCTCCGAT-GGGGG 13624712 Query 306 TTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCC 365 |||||||| || |||||||| ||||||| ||| |||||||||| ||| ||||||||||| Sbjct 13624711 TTCTTTTCACCCTTCCCTCATGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCC 13624652 Query 366 TTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||| | | |||||| | ||||| || || | |||| || | ||||||| Sbjct 13624651 TTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGTCCCATGCTACTCG 13624597 >seq91 Length=122179 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 13972 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 13914 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 13913 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 13854 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 13853 GTGGTCCCCC 13844 >seq3 Length=24928530 Score = 95.1 bits (104), Expect = 3e-17 Identities = 176/247 (71%), Gaps = 16/247 (6%) Strand=Plus/Minus Query 54 CTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCG 113 ||||| ||||| | |||||| ||| || |||| ||| ||||||||| ||| | ||| | Sbjct 17094898 CTCCACTTAGTT-TCACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTTT-G 17094843 Query 114 GGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA 173 | || || | || ||| | |||||| |||||||||||| ||||||| |||| | Sbjct 17094842 GATCCATAAGC-AGTGACAATT-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTG 17094786 Query 174 --TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCA 231 ||| |||||| ||||| || |||||| | | |||| | ||| || |||| Sbjct 17094785 GGTTCCCTTAAGC-----CACTGCCTATGAGTCGCAGCCTCATTCTTCAACAGACACGCG 17094731 Query 232 GTCACCCAACAAAGTGGG--CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTC 289 ||| | | || | | ||||||||||||| || |||||||||| | |||||||| Sbjct 17094730 GTCCTCAATTAACATAGATCCTCCCACTGCTTGAGAGCTTACGGTTTCATGTTCTATTTC 17094671 Query 290 ACTCCCC 296 ||||||| Sbjct 17094670 ACTCCCC 17094664 >seq2 Length=18500646 Score = 78.8 bits (86), Expect = 2e-12 Identities = 71/88 (81%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||||||||||| || || ||||||| | ||||||||||||||| | || ||||| Sbjct 3932881 CTCCCACTGCTTGAGAGCTTATGGTTTCATGTTCTATTTCACTCCCC-AGCGGGAGTTCT 3932823 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTC 337 |||| || || |||||| |||||| ||| Sbjct 3932822 TTTCACCCTTTCCTCACAGTACTAATTC 3932795 >seq4 Length=17356267 Score = 75.2 bits (82), Expect = 3e-11 Identities = 119/159 (75%), Gaps = 9/159 (6%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 11584482 CCACAACTCAT-CCGCTGA-TTGTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 11584426 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| || | |||| |||| | ||| Sbjct 11584425 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCTAG-GTTCGAATCTA-TAAGCAGT 11584370 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCT 167 || | |||||| |||||||||||||| |||||| || Sbjct 11584369 AAC-AATTGCCCTATTAAGACTCGCTTTT-GCTACGGCT 11584333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241398413824