Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq16236 158 2e-36 seq89 116 6e-24 seq16 96.9 6e-18 seq11 80.6 4e-13 seq3 77.0 5e-12 seq9 73.4 7e-11 >seq16236 Length=153324 Score = 158 bits (174), Expect = 2e-36 Identities = 206/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 101427 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 101368 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 101367 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 101308 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 101307 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 101248 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 101247 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 101188 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 101187 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 101143 Score = 158 bits (174), Expect = 2e-36 Identities = 206/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 137068 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 137127 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 137128 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 137187 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 137188 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 137247 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 137248 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 137307 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 137308 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 137352 >seq89 Length=122847 Score = 116 bits (128), Expect = 6e-24 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 69 ATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAA 128 || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 117350 ATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTT 117291 Query 129 AACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCC 188 |||||| || | ||||||||||| | ||| || | ||||| | Sbjct 117290 GGTAGTTTCCCCCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGC 117231 Query 189 CGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCG 248 | ||||| | |||||| |||||| | |||||||||||||||| ||| || |||||| Sbjct 117230 CACCTACCGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCG 117171 Query 249 CGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||| ||||||||| ||||||| | ||| || Sbjct 117170 CGGCTGCTGGCACAGAGTTAGCCGATGCTTATTTCCCAGATA 117129 >seq16 Length=4963887 Score = 96.9 bits (106), Expect = 6e-18 Identities = 187/272 (69%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 |||| |||||| | | |||||| || |||||| || ||||| | | || |||| Sbjct 1607956 CTCAATGTCAGTATCGGCCCAGCAGAGTGCTTTCGCCGTTGTTGTTCTTTCTGATCTCTA 1608015 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 |||||||||||||| ||| | |||||| |||| | | | |||| | |||| Sbjct 1608016 CGCATTTCACCGCTCCACT-GAAATTCCCTCTGCCCTTACTGTACTCCAACTTGGTAGTT 1608074 Query 136 TCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194 || | ||| | ||| ||||||||||| | ||| || | ||||| || |||| Sbjct 1608075 TCCACTGCCTGTCTA-GGGTTGAGCCCTGGGATTTGACGGCAGACTTAAAAAGCCACCTA 1608133 Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254 || | |||||| |||||| | || ||||| |||||| | | || |||||| ||||| Sbjct 1608134 CAGACGCTTTACGCCCAATCATTCTAGATAATGCTTGCATCATCTGTCTTACCGTGGCTG 1608193 Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286 || || |||||||| ||||||||| || Sbjct 1608194 TTGAGACAGAGTTAGCCAATGCTTATTCCCCA 1608225 >seq11 Length=15446199 Score = 80.6 bits (88), Expect = 4e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 214 AAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGT 273 || |||| | ||| |||||| || ||| |||||||||||||||||||| ||||||||| Sbjct 12619014 AAGTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGG 12618955 Query 274 GGCTTATTCCTC 285 ||||| |||||| Sbjct 12618954 GGCTTCTTCCTC 12618943 >seq3 Length=24928530 Score = 77.0 bits (84), Expect = 5e-12 Identities = 87/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 765738 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 765679 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTC 122 | || |||||||||||||||||| ||| | |||||| ||||| || | | |||| Sbjct 765678 CCGATCTCTACGCATTTCACCGCTCCACCAGAAATTCCCTTTGCCCCTACCGTACTC 765622 >seq9 Length=12411895 Score = 73.4 bits (80), Expect = 7e-11 Identities = 88/120 (73%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 10832388 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 10832329 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 10832328 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 10832269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828669641156