Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq16236 268 1e-69 seq91 185 1e-44 seq119 165 1e-38 seq9 158 2e-36 seq4 127 3e-27 seq5 120 5e-25 seq16 102 1e-19 seq3 96.9 5e-18 seq1 78.8 1e-12 >seq16236 Length=153324 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 107418 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 107359 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 107358 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 107299 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 107298 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 107239 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 107238 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 107179 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 107178 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 107146 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 131077 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 131136 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 131137 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 131196 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 131197 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 131256 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 131257 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 131316 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 131317 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 131349 >seq91 Length=122179 Score = 185 bits (204), Expect = 1e-44 Identities = 181/233 (78%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 ||||||||| ||| || ||| |||||| ||||| ||| |||| ||||| | ||| | Sbjct 16396 AACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTAGACCATAGGTTGGCCCAAC 16337 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 || |||||||||||||| || ||||||| || | ||| || || ||| ||| Sbjct 16336 CCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGAT 16277 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| ||||||||||||| || |||||| |||||| ||| ||| || ||| ||| |||||| Sbjct 16276 AGGAACCGAACTGTCTCACGTCGTTCTAAACCCAACTCACGTACCACTTAAATCGGCGAA 16217 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || | |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 16216 CAATCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 16164 >seq119 Length=77163 Score = 165 bits (182), Expect = 1e-38 Identities = 120/139 (86%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 93 GAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCC 152 ||||| |||| ||||||||||||||||||| ||| || ||||||||| || ||||| Sbjct 40567 GAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCC 40626 Query 153 CACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTT 212 ||| |||||| ||||||||||||||| |||||||||||||||||||| ||| || |||| Sbjct 40627 CACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTT 40686 Query 213 AATGGGCGAACAGCCCAAC 231 |||||||||||| |||||| Sbjct 40687 AATGGGCGAACAACCCAAC 40705 >seq9 Length=12411895 Score = 158 bits (174), Expect = 2e-36 Identities = 166/218 (76%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | ||||||||| ||| || ||| |||||| ||||| ||| Sbjct 5006876 CAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTAG 5006817 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 5006816 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 5006757 Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 || || ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct 5006756 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 5006697 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 || ||| ||| |||||||| || |||||||||||||| Sbjct 5006696 ACCACTTAAATCGGCGAACAACCGAACCCTTGGGACCT 5006659 >seq4 Length=17356267 Score = 127 bits (140), Expect = 3e-27 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 125 GGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGAC 184 ||| || ||||||||| | |||||||| || ||| |||| |||||||||| | || Sbjct 6322400 GGAAAGGTCCTCTCAATGCTGTAACGCCCACACCGAATATGGACTGAACTGTCTCACAAC 6322341 Query 185 GTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTAC 244 |||||||||| ||||| ||| || |||||||||| ||||||||||||| |||| || ||| Sbjct 6322340 GTTCTGAACCTAGCTCACGTACCGCTTTAATGGGTGAACAGCCCAACCTTTGGAACATAC 6322281 Query 245 TTCAGCCCCAGGATGAGACGAGCCG 269 | |||| ||||| | | |||||| Sbjct 6322280 TACAGCTCCAGGGGGCTAAGAGCCG 6322256 Score = 91.5 bits (100), Expect = 2e-16 Identities = 95/122 (78%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | ||||||| || ||||||| |||| ||||||||||||| |||| | | || Sbjct 16868360 GGCACGATAACTGGTACATCAGAGGTGCGTCCTTCCCGGTCCTCTCATACTTCGAAAAGG 16868419 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGG-ATAGGGACCGAACTGTCTCGCGACGTTCTG 190 || |||||| || |||| ||| |||| ||| | ||||||||||||| ||||||||| Sbjct 16868420 TCATCTCAATGCTCTAACGCGCAC-ACGGAATATGAACCGAACTGTCTCACGACGTTCTA 16868478 Query 191 AA 192 || Sbjct 16868479 AA 16868480 Score = 73.4 bits (80), Expect = 6e-11 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 92 AGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGC 151 |||||| |||| | ||||||||||||||||| ||| || |||| | || || |||| Sbjct 12929390 AGAGGTGCGTCCTTTCCGGTCCTCTCGTACTAGGGAAAGGTCCTTTTAATGCTCTAACGC 12929449 Query 152 CCACGACGGATAGGGACCGAACT 174 |||| |||||| |||||||||| Sbjct 12929450 CCACATCGGATATGGACCGAACT 12929472 >seq5 Length=18898134 Score = 120 bits (132), Expect = 5e-25 Identities = 110/140 (79%), Gaps = 7/140 (5%) Strand=Plus/Minus Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188 || ||||||||| | |||||||| || ||| ||||||||||| |||||| Sbjct 11173263 AGGTCCTCTCAATGCTGTAACGCCCACACCGAATATGGACCGAACTG-------ACGTTC 11173211 Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 |||||||||||| ||| || |||||||||| |||||||||||||||||| || |||| || Sbjct 11173210 TGAACCCAGCTCACGTACCGCTTTAATGGGTGAACAGCCCAACCCTTGGAACATACTACA 11173151 Query 249 GCCCCAGGATGAGACGAGCC 268 ||| |||| | || ||||| Sbjct 11173150 GCCTCAGGTGGCGAAGAGCC 11173131 >seq16 Length=4963887 Score = 102 bits (112), Expect = 1e-19 Identities = 96/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 19 TAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCAGT 77 ||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 4893921 TAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCACG 4893862 Query 78 ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCT 137 | ||||||| |||||||||| |||| ||||||||||||||||||| ||| || |||||| Sbjct 4893861 ATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCT 4893802 Query 138 C 138 | Sbjct 4893801 C 4893801 >seq3 Length=24928530 Score = 96.9 bits (106), Expect = 5e-18 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||| || || |||||| | ||||||| |||||| ||| ||| | || ||| | | Sbjct 24518612 GATAGGAACTTAATTGTCTCACAACGTTCTAAACCCAACTCACGTAACAATTAAATTGAC 24518671 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||| | |||||||||||||| ||||| |||||||||| || ||| ||||| || Sbjct 24518672 GAACAACTGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACAACG 24518727 >seq1 Length=18577331 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| |||| |||||||||| | || ||||||||||||||| || || |||||||||| Sbjct 6092740 GATATGGACTGAACTGTCTCACTACATTCTGAACCCAGCTCATGTACCGATTTAATGGGC 6092681 Query 220 GAACAGCC 227 |||||||| Sbjct 6092680 GAACAGCC 6092673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780677190896