Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq16236 322 1e-85 seq89 318 2e-84 seq7 250 7e-64 seq3 168 2e-39 seq11 120 9e-25 seq1 120 9e-25 seq13 114 4e-23 seq8 82.4 2e-13 >seq16236 Length=153324 Score = 322 bits (356), Expect = 1e-85 Identities = 278/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | | Sbjct 100916 GCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTC 100975 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 100976 CGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGC 101035 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||||||||| || | |||||||| ||||||||| | ||||| |||||||| | ||| Sbjct 101036 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAA 101095 Query 341 GGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGA 398 |||| |||||||| || ||| | | | ||||| |||||||||| || ||| | Sbjct 101096 GGCCCACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATA 101155 Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 ||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||| Sbjct 101156 AGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGG 101215 Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| | | |||||||||| || |||||||| || ||||||| Sbjct 101216 AATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 101256 Score = 322 bits (356), Expect = 1e-85 Identities = 278/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | | Sbjct 137579 GCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTC 137520 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 137519 CGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGC 137460 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||||||||| || | |||||||| ||||||||| | ||||| |||||||| | ||| Sbjct 137459 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAA 137400 Query 341 GGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGA 398 |||| |||||||| || ||| | | | ||||| |||||||||| || ||| | Sbjct 137399 GGCCCACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATA 137340 Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 ||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||| Sbjct 137339 AGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGG 137280 Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| | | |||||||||| || |||||||| || ||||||| Sbjct 137279 AATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTC 137239 >seq89 Length=122847 Score = 318 bits (352), Expect = 2e-84 Identities = 277/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | | Sbjct 116902 GCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTC 116961 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 116962 CGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGC 117021 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||||||||| || | |||||||| |||||| || | ||||| |||||||| | ||| Sbjct 117022 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCGGACGGAGCAATGCCGCGTGGAGGTAGAA 117081 Query 341 GGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGA 398 |||| |||||||| || ||| ||| | ||||| |||||||||| || | | | Sbjct 117082 GGCCCACGGGTCGTGAACTTCTTTCCCCGGAGAAGAAGCAATGACGGTATCTGGGAAATA 117141 Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 ||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||| Sbjct 117142 AGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGG 117201 Query 459 AATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| | | |||||||||| || |||||||| || ||||||| Sbjct 117202 AATGA-TTGGGCGTAAAGCGTCGGTAGGTGGCTTTTTAAGTC 117242 >seq7 Length=11725536 Score = 250 bits (276), Expect = 7e-64 Identities = 225/279 (81%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | | Sbjct 1725774 GCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTC 1725715 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 1725714 CGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGC 1725655 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||||||||| || | |||||||| ||||||||| | ||||| | |||||| | ||| Sbjct 1725654 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGTCGCGTGGAGGTAGAA 1725595 Query 341 GGCCTTCGGGTCGTAAAGCTC-TGTCCTCAAG--GAAGATAATGACGGTACTTGAGGAGG 397 |||| |||||||| || || | |||| || |||| ||||||| || ||| Sbjct 1725594 GGCCCACGGGTCGTGAACTTCTTTTCCTGGAGAAGAAG-CAATGACG-----TGGGGAAT 1725541 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 436 |||| ||||||||| ||||||||||||||||||| || Sbjct 1725540 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGAC 1725502 >seq3 Length=24928530 Score = 168 bits (186), Expect = 2e-39 Identities = 222/304 (73%), Gaps = 4/304 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||||||||||||| || || ||||||||| | ||| ||||| || | Sbjct 15902984 GCGTCTGATTAGCTAGTTGGTGAGCCAATAGCTTACCAAAACAGTGATTAGTAGTTGATC 15902925 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 | ||| | ||||| ||||| | ||| |||||||| ||||||| |||| ||||||| | Sbjct 15902924 TAAGATGATGATCAACCACACAGCGACTAAGACACGGCCCAAACTTCTACAGGAGGCAAC 15902865 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 ||||| ||| || ||||| ||| ||||||||| | ||||| ||||| || | ||| Sbjct 15902864 AGTGGAAAATTTTCCACAACGGGTGAAAGCCTGACGGAGCAATGCCGCATGGAGGTAGAA 15902805 Query 341 GGCCTTCGGGTCGTAAAGCTC-TGTCCTCAAG--GAAGATAATGACGGTACTTGAGGAGG 397 |||| | || || || || | |||| || |||| ||||| |||| ||| ||| Sbjct 15902804 GGCCCATGAGTTGTGAACTTCTTTTCCTGGAGAAGAAG-CAATGATGGTATTTGGGGAAT 15902746 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| | |||||| |||||||||||| | |||| || || || |||||||| | Sbjct 15902745 AAGCATTGACTAACTCAGTGCCAGCAGCCACAGTAAGACAGAGAATGCAAGCGTTATTCA 15902686 Query 458 GAAT 461 |||| Sbjct 15902685 GAAT 15902682 Score = 136 bits (150), Expect = 1e-29 Identities = 128/162 (79%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCA--GTAGCCGA 218 ||||||||||||||| ||||| | || |||||| ||||||| ||||| ||||| | Sbjct 3272073 GCGTCTGATTAGCTAATTGGTGAAACAATAGCTTACTAAGGCGATGATCACAGTAGCTGG 3272014 Query 219 CCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCA 278 | |||||| ||| | |||||| ||| || |||| || |||||||||||||| |||||| Sbjct 3272013 TCCGAGAGGATGACCAGCCACACTGGGACGAAGACCCGATCCAAACTCCTACGAGAGGCA 3271954 Query 279 GCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGC 320 |||||||||||| || |||||||| ||| | |||| ||| Sbjct 3271953 GCAGTGGGGAATTTTCGACAATGGGTGAAATCTAGATGGAGC 3271912 >seq11 Length=15446199 Score = 120 bits (132), Expect = 9e-25 Identities = 138/184 (75%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||| ||| |||| ||| ||||| ||| |||||| ||||||| || || || Sbjct 12618831 TGGGGAATCTTGGACAACGGGGGAAAGCACGATCCAGCAATATTGCGTGAGTGAAGATGG 12618890 Query 343 CCTTCG--GGTCGTAAAGCTCTGTCCTCAAGGAAG--ATAATGACGGTACTTGAGGAGGA 398 | | | | |||||||||| || || || | || ||||| ||| ||||| || Sbjct 12618891 GCAATGTCGCTTGTAAAGCTCTTTCATCGAGTGCGCGATCATGACAAGACTCGAGGAAGA 12618950 Query 399 AGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGG 458 |||||||||||||| |||||||||||||||||||| ||| |||||| || ||| | ||| Sbjct 12618951 AGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGG 12619010 Query 459 AATT 462 | || Sbjct 12619011 ACTT 12619014 >seq1 Length=18577331 Score = 120 bits (132), Expect = 9e-25 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||||||||| |||||||| ||| || | ||| |||| ||| ||||| |||| | | Sbjct 7205216 GCGTCTGATTAATTAGTTGGTGAGGCAATAGTTTATCAAGACGATGATCAATAGCTGTTC 7205275 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 ||||||| | |||| |||| | ||| ||||||| | | ||||||| |||| |||| Sbjct 7205276 TGAGAGGATAGTCGGTCACACATGGGCTGGGACACGGCCTAGACTCCTAAGGGAAGCAGT 7205335 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTG 331 ||| |||||| || | | ||||| |||| |||| | ||||| |||| ||| Sbjct 7205336 AGTCGGGAATTTTCCTTAGTGGGCGAAAGTCTGACGGAGCAATGCCGTGTG 7205386 >seq13 Length=5050363 Score = 114 bits (126), Expect = 4e-23 Identities = 160/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 290 TATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT-GAAGGCCTTCG 348 |||| | |||||| | ||||||| | | ||||| |||||||| | ||| ||||||| || Sbjct 666030 TATTCCGCAATGGACGAAAGCCTAACGGAGCAATGCCGCGTG-GAGATAGAAGGCCCACG 665972 Query 349 GGTCGTAAAGCTCTGTCCTCAAGGAAGAT--AATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||||| || ||| | | | ||||| |||||||||| || ||| |||| ||| Sbjct 665971 GGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCATCGG 665912 Query 407 CTAACTACGTGCCAGCAGCCGCGGTA-ATACGTAGGGGGCTAGCGTTATCCGGAATTACT 465 |||||| ||||||||||| ||||| | | ||| || |||||||||| ||| | | Sbjct 665911 CTAACTCTATGCCAGCAGCCACGGTACAAAAAGAGGATGCAAGCGTTATCCAAAATGA-T 665853 Query 466 GGGGCGTA--AAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||||||| ||| || ||||||| || ||||||| Sbjct 665852 TGGGCGTAAGAAGCGTTTGTAGGTGACTTTTTAAGTC 665816 >seq8 Length=21523998 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 275 GGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGC 334 |||||||||||||||| || | |||||||| ||||||||| | ||||| |||||||| Sbjct 3797518 GGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAG 3797577 Query 335 GATGAAGGCCTTCGGGTCGTAAA 357 | ||||||| |||||||| || Sbjct 3797578 GTAGAAGGCCCACGGGTCGTGAA 3797600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497356849664