Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15 168 5e-37 seq13 150 1e-31 >seq15 Length=10047770 Score = 168 bits (186), Expect = 5e-37 Identities = 390/579 (67%), Gaps = 13/579 (2%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||||||| |||| | || ||| |||||||| || || ||||| ||||||| Sbjct 1769879 TGTTCCCCATCCAGTACCCACAAATCTGGGAAATGTACAAGAAAGCCGAAGCGTCCTTCT 1769820 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCG 61183 |||| | |||||| || ||||||||| ||||| | ||||||| | | | Sbjct 1769819 GGACTGCGGAGGAAGTGGATTTGTCCCAAGACCTCCGCCACTGGGAAAACCTCACTTCTG 1769760 Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 || | |||||||| ||||| || | || ||||| ||||| || || || || || Sbjct 1769759 ACGAGAAGCATTTCATCAAACACGTTCTCGCCTTCTTCGCCGCCTCTGATGGCATTGTTT 1769700 Query 61244 ATGAGAAT-TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| || |||| || ||| | |||| || || || || ||||| ||| ||| Sbjct 1769699 TGGAGAACCTTGCTGGA-CGCTTCATGAAGGAAGTTCAGGTCTCCGAGGCTCGTGCCTTC 1769641 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 || || || ||||||||||| ||||| |||| || |||||||| ||| || | | || Sbjct 1769640 TATGGGTTTCAGATTGCCATTGAGAACATCCATTCCGAGATGTATAGTCTTTTGCTTGAA 1769581 Query 61363 ACGTACATCAGGGA-GCGGGCG-GAACGTGAAC--GATTGTTCAATGCCATCGAGACGAT 61418 | || || | ||| ||| || ||| |||| | || ||| || |||||||| | Sbjct 1769580 TCCTATATAAAGGATTCGGCCGAGAA---GAACATGCTTTTTC-GCGCAATCGAGACTGT 1769525 Query 61419 ACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTAC 61478 || ||| || ||| || | ||||| || ||||| | | | | || Sbjct 1769524 CCCATGTGTGGAGAAGAAGGCTAAATGGGCTTTACGCTGGAT---CGATGGCTCTGAAAC 1769468 Query 61479 ATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTT 61538 |||| |||||||| | | |||||| || || || |||||||| ||| || Sbjct 1769467 TTTTGCCGAACGATTAATCGGATTTGCTTGTGTGGAAGGCATATTTTTCTCGGGAAGCTT 1769408 Query 61539 TGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598 ||||| |||||| ||||||| ||||| | ||||| ||| | || ||| ||| || Sbjct 1769407 CTGTGCAATATTTTGGCTGAAGAAGCGTGGTTTGATGCCGGGTTTAACTTTCTCCAACGA 1769348 Query 61599 GTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || || ||||| || ||||| |||| || |||||||| Sbjct 1769347 ATTAATCTCACGGGATGAGGGTTTGCACTGCGATTTTGC 1769309 >seq13 Length=5050363 Score = 150 bits (166), Expect = 1e-31 Identities = 368/547 (67%), Gaps = 13/547 (2%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 ||||||||||| || ||||||||||||||||| | ||||| || ||||| || | ||| Sbjct 3175678 ATGTACAAAAAAGCAGAAGCTTCCTTCTGGACCGCCGAGGAAGTTGATTTATCTCAGGAC 3175737 Query 61156 ATGAATGACTGGGA-GCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | | ||||| || | | | || || | |||||| | ||||| || | || Sbjct 3175738 CTCCGCCATTGGGAAGCCCTCACCTC-CGACGAGAAGCATTTCGTCAAACACGTCCTCGC 3175796 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 |||||||| || || || |||||||| || ||| | | ||| ||| | | || Sbjct 3175797 CTTCTTTGCTGCCTCCGATGGTATCGTTTTGGAAAATCTCGCTGGACGCTTCATGAAAGA 3175856 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 ||| || | || ||||| ||| |||||||||||||| |||||||| ||||| | || Sbjct 3175857 GGTCCAGATCTCCGAGGCCCGTGCCTTCTACGGCTTCCAAATTGCCATTGAGAACATTCA 3175916 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCG-GAACGTGAA 61392 || |||||||||||| |||| | || | ||||||| || ||| || ||| || Sbjct 3175917 TTCCGAGATGTACAGTCTTCTGCTTGAGTCTTACATCAAAGACTCGGCCGAGAA---AAA 3175973 Query 61393 CGA-TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTT 61451 | | | ||| || || ||||| | || ||| | ||| || | |||||| | Sbjct 3175974 CCACCTCTTCCGCGCAATTGAGACCGTTCCTTGCGTGGAAAAGAAGGCCAAGTGGGCCAT 3176033 Query 61452 CAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 ||||| | | | | |||| ||| || || | || ||||| || Sbjct 3176034 GCGCTGGAT---TGATGGCTCTGAATCCTTTGCTGAGCGGTTAGTCGCCTTTGCTTGTGT 3176090 Query 61512 CGAGGGTGTATTTTTC-AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 ||||| |||||||| | ||| | | || ||| || ||||||||||| || || || Sbjct 3176091 TGAGGGGATATTTTTCTCGGGGAGCTTCTG-CGCCATATTTTGGTTGAAAAAGCGCGGGA 3176149 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| || |||| ||| |||||| || || || || || || || ||||||||| Sbjct 3176150 TGATGCCGGGCTTGACTTTCTCCAATGAATTAATTTCGCGAGATGAAGGTTTGCATTGTG 3176209 Query 61631 ATTTTGC 61637 ||||||| Sbjct 3176210 ATTTTGC 3176216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397489330735040