Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 1e-13 >seq1 Length=146306 Score = 82.4 bits (90), Expect = 1e-13 Identities = 210/314 (67%), Gaps = 12/314 (4%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG------CCGAGTG 65 |||| |||||||||| | |||| ||| || ||||| || |||| ||| | | Sbjct 108617 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCTCAAGCAGTGGGAGGAGGCGCCGTG-G 108675 Query 66 ATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGT 125 | | |||| |||||||| ||| | |||||||| ||| | | | | || || ||| Sbjct 108676 AAGCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGT 108734 Query 126 TAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGT 185 |||||| | ||| ||||| || ||||||||| ||| | ||||| | || | Sbjct 108735 TAAGGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACT 108790 Query 186 GGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGT 245 | | ||| |||| | |||||||| ||| || |||| ||||| ||| | | Sbjct 108791 GCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTA 108850 Query 246 GATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGA 305 |||||| |||||||| | |||||| | | ||||||| | | || ||||||||| Sbjct 108851 AGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGA 108910 Query 306 AAGGCCAATCAAAC 319 || |||| || ||| Sbjct 108911 AATGCCACTCGAAC 108924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 969806499840