Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20
2015-10-23] 307,720 sequences; 665,278,925 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 2e-15
>seq1
Length=146306
Score = 87.8 bits (96), Expect = 2e-15
Identities = 121/166 (73%), Gaps = 4/166 (2%)
Strand=Plus/Plus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83
|||| |||||| |||| ||| || |||| ||| || ||| || | | | ||||
Sbjct 109762 AAACCGACACAGGTAGGTAGGTAGAGAATACCTAGGGGCGCGAGACAA-CTCTCTCTAAG 109820
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143
||||| |||||| | ||| |||||||||||| || |||| || | || ||| || ||
Sbjct 109821 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCCCCTCACAAA--GGGGG 109878
Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
|| || || ||| || ||| |||||||| |||||||||||| ||
Sbjct 109879 TCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 109924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529616472880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |