Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20
2015-10-23] 307,720 sequences; 665,278,925 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq10594 98.7 5e-19
seq171 75.2 5e-12
seq149217 71.6 6e-11
>seq10594
Length=7444
Score = 98.7 bits (108), Expect = 5e-19
Identities = 84/102 (82%), Gaps = 4/102 (4%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| ||||||||| |||| | ||||| ||||||||||||||||||||
Sbjct 1397 GGAAAAGAAACTAACAAGGATTCCCCTAGTAGCAGCGAGCGAACAGGGAAGAGCCCAGCG 1456
Query 61 CCGAAT-CCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101
| |||| ||||| || || | | |||||| |||| ||||
Sbjct 1457 CTGAATCCCCCGGGCCTCGCTCG---GCGGGAAATGTAGCGT 1495
>seq171
Length=61800
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 16970 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAGC 16912
>seq149217
Length=1129
Score = 71.6 bits (78), Expect = 6e-11
Identities = 50/57 (88%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57
|||||||||||| || |||||||||| |||||| ||||| |||| ||||| ||||||
Sbjct 775 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACAGCGAGCGAACCGGGAATAGCCCA 831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 229735324800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |